WormBase Tree Display for Gene: WBGene00021321
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| WBGene00021321 | SMap | S_parent | Sequence | Y34B4A | ||
|---|---|---|---|---|---|---|
| Identity (6) | ||||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | nspg | |||||
| Allele (26) | ||||||
| RNASeq_FPKM (74) | ||||||
| Ortholog (22) | ||||||
| Paralog | WBGene00009883 | Caenorhabditis elegans | From_analysis | TreeFam | ||
| WBGene00010793 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| WBGene00011856 | ||||||
| WBGene00017591 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| WBGene00018951 | ||||||
| WBGene00021805 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| WBGene00022490 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| WBGene00021322 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| Structured_description | Automated_description | Enriched in OLL; PVD; and intestine based on tiling array and RNA-seq studies. Is affected by several genes including skn-1; glp-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including manganese chloride; Psoralens; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | Y34B4A.5 | ||||
| Corresponding_CDS_history | Y34B4A.5:wp187 | |||||
| Corresponding_transcript | Y34B4A.5.1 | |||||
| Other_sequence | FD514189.1 | |||||
| CSC01330_1 | ||||||
| Associated_feature | WBsf648092 | |||||
| WBsf235698 | ||||||
| Experimental_info | RNAi_result | WBRNAi00055820 | Inferred_automatically | RNAi_primary | ||
| Expr_pattern | Expr1024061 | |||||
| Expr1159349 | ||||||
| Expr2007216 | ||||||
| Expr2025448 | ||||||
| Microarray_results (17) | ||||||
| Expression_cluster (154) | ||||||
| Map_info | Map | X | Position | -5.91503 | ||
| Positive | Positive_clone | Y34B4A | Inferred_automatically | From sequence, transcript, pseudogene data | ||
| Pseudo_map_position | ||||||
| Reference | WBPaper00041771 | |||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
| Method | Gene |
