WormBase Tree Display for Gene: WBGene00020972
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WBGene00020972 | SMap | S_parent | Sequence | W03B1 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | trpl-2 | Person_evidence | WBPerson260 | |||
Sequence_name | W03B1.2 | ||||||
Molecular_name | W03B1.2 | ||||||
W03B1.2.1 | |||||||
CE34601 | |||||||
Other_name | CELE_W03B1.2 | Accession_evidence | NDB | BX284604 | |||
Public_name | trpl-2 | ||||||
DB_info | Database | AceView | gene | 4F95 | |||
WormQTL | gene | WBGene00020972 | |||||
WormFlux | gene | WBGene00020972 | |||||
NDB | locus_tag | CELE_W03B1.2 | |||||
Panther | gene | CAEEL|WormBase=WBGene00020972|UniProtKB=Q23141 | |||||
family | PTHR13800 | ||||||
NCBI | gene | 177198 | |||||
RefSeq | protein | NM_068140.4 | |||||
TREEFAM | TREEFAM_ID | TF315286 | |||||
TrEMBL | UniProtAcc | Q23141 | |||||
UniProt_GCRP | UniProtAcc | Q23141 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | trpl | ||||||
Allele (104) | |||||||
Strain | WBStrain00032570 | ||||||
WBStrain00037290 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00077413 | ||||||
00077414 | |||||||
00077415 | |||||||
00077416 | |||||||
Ortholog (22) | |||||||
Paralog | WBGene00004149 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WormBase-Compara | |||||||
WBGene00021408 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WormBase-Compara | |||||||
WBGene00021404 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
WormBase-Compara | |||||||
WBGene00000425 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00001651 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00001795 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00001796 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00008731 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Predicted to enable monoatomic cation channel activity. Predicted to be involved in monoatomic cation transmembrane transport. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | W03B1.2 | |||||
Corresponding_CDS_history | W03B1.2:wp102 | ||||||
Corresponding_transcript | W03B1.2.1 | ||||||
Associated_feature | WBsf645916 | ||||||
WBsf228186 | |||||||
Experimental_info | RNAi_result | WBRNAi00019538 | Inferred_automatically | RNAi_primary | |||
WBRNAi00036216 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00103561 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00054653 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1015534 | ||||||
Expr1158196 | |||||||
Expr2017504 | |||||||
Expr2035643 | |||||||
Drives_construct | WBCnstr00024753 | ||||||
Construct_product | WBCnstr00024753 | ||||||
Microarray_results (20) | |||||||
Expression_cluster (127) | |||||||
Interaction | WBInteraction000240310 | ||||||
WBInteraction000274514 | |||||||
WBInteraction000318539 | |||||||
WBInteraction000338019 | |||||||
WBInteraction000380204 | |||||||
WBInteraction000409292 | |||||||
Map_info | Map | IV | Position | 0.154949 | |||
Positive | Positive_clone | W03B1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00027280 | ||||||
WBPaper00038142 | |||||||
WBPaper00043908 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |