WormBase Tree Display for Gene: WBGene00020972

WBGene00020972 SMap: S_parent: Sequence: W03B1
  Identity: Version: 2
    Name: CGC_name: trpl-2 Person_evidence: WBPerson260
      Sequence_name: W03B1.2
      Molecular_name: W03B1.2
        W03B1.2.1
        CE34601
      Other_name: CELE_W03B1.2 Accession_evidence: NDB BX284604
      Public_name: trpl-2
    DB_info: Database: AceView gene 4F95
        WormQTL gene WBGene00020972
        WormFlux gene WBGene00020972
        NDB locus_tag CELE_W03B1.2
        Panther gene CAEEL|WormBase=WBGene00020972|UniProtKB=Q23141
          family PTHR13800
        NCBI gene 177198
        RefSeq protein NM_068140.4
        TREEFAM TREEFAM_ID TF315286
        TrEMBL UniProtAcc Q23141
        UniProt_GCRP UniProtAcc Q23141
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 11 Apr 2012 13:49:30 WBPerson2970 Name_change: CGC_name: trpl-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: trpl
    Allele (104)
    Strain: WBStrain00032570
      WBStrain00037290
    RNASeq_FPKM (74)
    GO_annotation: 00077413
      00077414
      00077415
      00077416
    Ortholog: WBGene00059502 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00072114 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00024846 Caenorhabditis briggsae From_analysis: OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00153536 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00194537 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CSP26.g4520 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g5566 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g7131 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g12325 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g12330 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g585 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6988 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g9686 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g12997 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00191.g6650 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_IV.g14699 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00227.g7495 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_014669 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_40118300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g10177 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00177360 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00076273 Caenorhabditis remanei From_analysis: WormBase-Compara
    Paralog: WBGene00004149 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00021408 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00021404 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00000425 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001651 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001795 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001796 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00008731 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable monoatomic cation channel activity. Predicted to be involved in monoatomic cation transmembrane transport. Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: W03B1.2
    Corresponding_CDS_history: W03B1.2:wp102
    Corresponding_transcript: W03B1.2.1
    Associated_feature: WBsf645916
      WBsf228186
  Experimental_info: RNAi_result: WBRNAi00019538 Inferred_automatically: RNAi_primary
      WBRNAi00036216 Inferred_automatically: RNAi_primary
      WBRNAi00103561 Inferred_automatically: RNAi_primary
      WBRNAi00054653 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015534
      Expr1158196
      Expr2017504
      Expr2035643
    Drives_construct: WBCnstr00024753
    Construct_product: WBCnstr00024753
    Microarray_results (20)
    Expression_cluster (127)
    Interaction: WBInteraction000240310
      WBInteraction000274514
      WBInteraction000318539
      WBInteraction000338019
      WBInteraction000380204
      WBInteraction000409292
  Map_info: Map: IV Position: 0.154949
    Positive: Positive_clone: W03B1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027280
    WBPaper00038142
    WBPaper00043908
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene