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WormBase Tree Display for Gene: WBGene00019970

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Name Class

WBGene00019970SMapS_parentSequenceR08F11
IdentityVersion1
NameSequence_nameR08F11.7
Molecular_nameR08F11.7
R08F11.7.1
CE12592
Other_nameCELE_R08F11.7Accession_evidenceNDBBX284605
Public_nameR08F11.7
DB_infoDatabaseAceViewgene5E267
WormQTLgeneWBGene00019970
WormFluxgeneWBGene00019970
NDBlocus_tagCELE_R08F11.7
PanthergeneCAEEL|WormBase=WBGene00019970|UniProtKB=O01892
familyPTHR11475
NCBIgene187708
RefSeqproteinNM_071647.5
TrEMBLUniProtAccO01892
UniProt_GCRPUniProtAccO01892
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:02WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (65)
RNASeq_FPKM (74)
GO_annotation00026086
00026087
00026088
00026089
00026090
00026091
00124700
00124701
00124702
Ortholog (37)
ParalogWBGene00004256Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00004257Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008627Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00009897Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011530Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015841Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016700Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017968Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019613Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022743Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable peroxidase activity. Involved in defense response to Gram-positive bacterium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSR08F11.7
Corresponding_transcriptR08F11.7.1
Other_sequenceNBC00102_1
NB08310
JI247124.1
Oden_isotig27439
Associated_featureWBsf999686
WBsf1019423
WBsf231609
Experimental_infoRNAi_resultWBRNAi00017602Inferred_automaticallyRNAi_primary
WBRNAi00051562Inferred_automaticallyRNAi_primary
Expr_patternExpr1028450
Expr1155240
Expr2005501
Expr2023720
Drives_constructWBCnstr00025458
Construct_productWBCnstr00025458
Microarray_results (18)
Expression_clusterWBPaper00033070:Elbe_upregulated
WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
WBPaper00042194:nhr-114(RNAi)_downregulated
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00042561:smgl-2(RNAi)_upregulated
WBPaper00044316:CH3HgCl_7.5uM_downregulated
WBPaper00044743:wdr-23_neuron_upregulated
WBPaper00045390:tunicamycin_downregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00050121:mir-60(n4947)_upregulated
WBPaper00050712:RC301_vs_DA650_4h-PA_upregulated
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050801:SET-4_dauer_regulome
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(ot267)_downregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053318:Aging_downregulated_mRNA_N2
WBPaper00053388:dauer_regulated_Cluster3
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
WBPaper00053771:up_at_24h-NaCl
WBPaper00054493:hpl-2(tm1489)_upregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055386:daf-2(e1370)_downregulated
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
WBPaper00056039:hda-6(ok3203)_upregulated
WBPaper00056139:soil-microbiota_upregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00058691:cfp-1(tm6369)_upregulated
WBPaper00058711:wdr-5(ok1417)_upregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059378:cec-4(ok3124);lmn-1(Y59C)_vs_lmn-1(Y59C)_downregulated
WBPaper00059426:SiO2-nanoparticles_downregulated
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00059754:C.neoformans_H99_upregulated
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00060100:SiNP_upregulated_mRNA
WBPaper00060764:swsn-1(os22ts)_upregulated
WBPaper00060764:swsn-9(ok1354)_upregulated
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061341:28C_48h_upregulated
WBPaper00061479:mep-1(ne4629)_upregulated
WBPaper00061527:M04G7.1-R06F6.7
WBPaper00061530:nhr-49(e2144)_upregulated
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00062103:neuron_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062184:PA14_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062335:sir-2.1(ok434)_upregulated_L3
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00064130:Beta-Amyloid_24h_downregulated_mRNA
WBPaper00064156:lbp-3(overexpress)_upregulated
WBPaper00064156:lipl-4(overexpress)_upregulated
WBPaper00064473:ets-4(rrr16)_upregulated
WBPaper00064769:him-17(me24)_downregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065288:mdt-15(tm2182)_upregulated
WBPaper00065746:tmc-1(rg1003)_downregulated
WBPaper00065841:13_1
WBPaper00065841:41_0
WBPaper00065841:41_1
WBPaper00065841:41_2
WBPaper00065841:43_0
WBPaper00065841:47_1
WBPaper00065841:78_0
WBPaper00065975:P-body_vs_oocyte_depleted
cgc4489_group_18
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00036375:depleted_in_PVD_OLL
WBPaper00040210:Chlorpyrifos_24C_regulated
WBPaper00040821:Au-NP_regulated
WBPaper00040858:eQTL_regulated_old
WBPaper00042548:miRISC_enriched
WBPaper00045673:colistin_downregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00048989:N2_allantoin_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00055899:2,4-Dinitroanisole_regulated
WBPaper00055899:nitroguanidine_regulated
Interaction (34)
Map_infoPositivePositive_cloneR08F11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV-7.99598
ReferenceWBPaper00044963
WBPaper00064552
MethodGene