WormBase Tree Display for Gene: WBGene00009897

WBGene00009897 SMap: S_parent: Sequence: F49E12
  Identity: Version: 2
    Name: CGC_name: skpo-1 Person_evidence: WBPerson3395
      Sequence_name: F49E12.1
      Molecular_name: F49E12.1
        F49E12.1.1
        CE03378
      Other_name: CELE_F49E12.1 Accession_evidence: NDB BX284602
      Public_name: skpo-1
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 25 Mar 2014 09:31:05 WBPerson2970 Name_change: CGC_name: skpo-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: skpo
    Allele (64)
    Strain: WBStrain00032135
    RNASeq_FPKM (74)
    GO_annotation (19)
    Ortholog (29)
    Paralog: WBGene00004256 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00004257 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00008627 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00022743 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00017968 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00015841 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00019970 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00019613 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00016700 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00011530 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Enables peroxidase activity. Involved in defense response to Gram-positive bacterium; determination of adult lifespan; and negative regulation of gene expression. Predicted to be located in extracellular space. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F49E12.1
    Corresponding_transcript: F49E12.1.1
    Other_sequence (25)
    Associated_feature: WBsf665785
      WBsf665786
      WBsf665787
      WBsf223491
      WBsf223492
  Experimental_info: RNAi_result: WBRNAi00015316 Inferred_automatically: RNAi_primary
      WBRNAi00047849 Inferred_automatically: RNAi_primary
      WBRNAi00032537 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1011532
      Expr1151682
      Expr2015834
      Expr2034067
    Drives_construct: WBCnstr00031833
    Construct_product: WBCnstr00031833
    Regulate_expr_cluster: WBPaper00061081:skpo-1(ok1640)_downregulated_OG1RF
      WBPaper00061081:skpo-1(ok1640)_downregulated_OP50
      WBPaper00061081:skpo-1(ok1640)_upregulated_OG1RF
      WBPaper00061081:skpo-1(ok1640)_upregulated_OP50
    Antibody: WBAntibody00002521
    Microarray_results (18)
    Expression_cluster (231)
    Interaction (218)
  Map_info: Map: II Position: 0.769953
    Positive: Positive_clone: F49E12 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00043278
    WBPaper00044963
    WBPaper00055090
    WBPaper00056090
    WBPaper00061081
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene