WormBase Tree Display for CDS: R08F11.7
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R08F11.7 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | R08F11 | |||
Structure | Source_exons | 1 | 718 | |||
1127 | 1306 | |||||
1475 | 1888 | |||||
2568 | 3577 | |||||
DB_info | Database | TrEMBL | UniProtAcc | O01892 | ||
UniProt | UniProtAcc | O01892 | ||||
UniProt_GCRP | UniProtAcc | O01892 | ||||
AlphaFold | entry | O01892 | ||||
NCBI_protein | GI_number | GI:351064016 | ||||
Protein_id | CHROMOSOME_V | CCD72312 | 1 | |||
DB_remark | contains similarity to Pfam domain PF03098 (Animal haem peroxidase); contains similarity to Interpro domains IPR019791 (Haem peroxidase, animal-type), IPR037120 (Haem peroxidase domain superfamily, animal type), IPR010255 (Haem peroxidase superfamily) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00019970 | ||||
Corresponding_transcript | R08F11.7.1 | |||||
Corresponding_protein | CE12592 | |||||
Corresponding_PCR_product | cenix:62-c1 | |||||
mv_R08F11.7 | ||||||
sjj_R08F11.7 | ||||||
Corresponding_oligo_set (17) | ||||||
Matching_cDNA | male_Nanopore_Roach_88640 | Inferred_automatically | transcript_builder.pl | |||
young_adult_Nanopore_Roach_71245 | Inferred_automatically | transcript_builder.pl | ||||
yk1136f11.5 | Inferred_automatically | transcript_builder.pl | ||||
RNAi_result | WBRNAi00017602 | |||||
WBRNAi00051562 | ||||||
Microarray_results (18) | ||||||
Brief_identification | Peroxidase | Accession_evidence | UniProt | TR:O01892 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |