WormBase Tree Display for CDS: R08F11.7
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| R08F11.7 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | R08F11 | |||
| Structure | Source_exons | 1 | 718 | |||
| 1127 | 1306 | |||||
| 1475 | 1888 | |||||
| 2568 | 3577 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | O01892 | ||
| UniProt | UniProtAcc | O01892 | ||||
| UniProt_GCRP | UniProtAcc | O01892 | ||||
| AlphaFold | entry | O01892 | ||||
| NCBI_protein | GI_number | GI:351064016 | ||||
| Protein_id | CHROMOSOME_V | CCD72312 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF03098 (Animal haem peroxidase); contains similarity to Interpro domains IPR019791 (Haem peroxidase, animal-type), IPR037120 (Haem peroxidase domain superfamily, animal type), IPR010255 (Haem peroxidase superfamily) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00019970 | ||||
| Corresponding_transcript | R08F11.7.1 | |||||
| Corresponding_protein | CE12592 | |||||
| Corresponding_PCR_product | cenix:62-c1 | |||||
| mv_R08F11.7 | ||||||
| sjj_R08F11.7 | ||||||
| Corresponding_oligo_set | 188793_at | |||||
| A_12_P100545 | ||||||
| Aff_R08F11.7 | ||||||
| GPL13394_WBGene00019970 | ||||||
| GPL13914_R08F11.7 | ||||||
| GPL14144_R08F11.7_1808-1867_0.888_31_C | ||||||
| GPL14144_R08F11.7_1959-2018_0.907_17_B | ||||||
| GPL14144_R08F11.7_2085-2144_0.734_243_A | ||||||
| GPL19516_CGZ0031475 | ||||||
| GPL21109_R08F11.7 | ||||||
| GPL3518_CE12592 | ||||||
| GPL8304_CE_WBGene00019970_A | ||||||
| GPL8673_R08F11_7P00978 | ||||||
| GPL8673_R08F11_7P01506 | ||||||
| GPL8673_R08F11_7P01857 | ||||||
| GPL9450_R08F11.7 | ||||||
| cea2.i.42547 | ||||||
| Matching_cDNA | male_Nanopore_Roach_88640 | Inferred_automatically | transcript_builder.pl | |||
| young_adult_Nanopore_Roach_71245 | Inferred_automatically | transcript_builder.pl | ||||
| yk1136f11.5 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00017602 | |||||
| WBRNAi00051562 | ||||||
| Microarray_results (18) | ||||||
| Brief_identification | Peroxidase | Accession_evidence | UniProt | TR:O01892 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
