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WormBase Tree Display for Gene: WBGene00019141

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Name Class

WBGene00019141SMapS_parentSequenceF59H6
IdentityVersion2
NameCGC_namebath-5Person_evidenceWBPerson655
Sequence_nameF59H6.11
Molecular_nameF59H6.11
F59H6.11.1
CE20917
Other_nameCELE_F59H6.11Accession_evidenceNDBBX284602
Public_namebath-5
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:01WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
222 Aug 2005 16:08:42WBPerson2970Name_changeCGC_namebath-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbath
AlleleWBVar00597528Inferred_automaticallyFrom strain object: VC2975
WBVar01499702
WBVar02120604
WBVar02123182
WBVar01576020
WBVar01576021
WBVar02075091
WBVar02099263
WBVar02123007
WBVar02121537
WBVar00165909
WBVar00165910
WBVar00165911
WBVar00165912
WBVar00165913
WBVar02122097
WBVar01500106
WBVar01296879
WBVar01296880
WBVar01296881
WBVar02124326
WBVar01296882
WBVar01296884
WBVar01296885
WBVar01296886
WBVar01296887
WBVar01296888
WBVar01296889
WBVar02108506
WBVar01296890
WBVar01296891
WBVar01296892
WBVar02121946
WBVar02124543
WBVar02122524
WBVar02120133
WBVar00091182
WBVar00709132
WBVar00709133
WBVar00709134
WBVar00709135
WBVar01412776
WBVar00709136
WBVar00709137
WBVar00709138
WBVar00709139
WBVar02097554
WBVar01665636
WBVar01684440
WBVar01665637
WBVar01665638
WBVar01684441
WBVar01684442
WBVar01665639
WBVar01684443
WBVar02122773
WBVar01684444
WBVar01684445
WBVar01684446
WBVar01684447
WBVar01684448
WBVar00358343
WBVar01684449
WBVar00358344
WBVar01684450
WBVar02121124
WBVar01684451
WBVar00358345
WBVar02129418
WBVar00358346
WBVar00358347
WBVar00358348
WBVar00358349
WBVar01705331
WBVar00091058
WBVar02109733
WBVar02122433
WBVar02120776
WBVar00545764
StrainWBStrain00037609
RNASeq_FPKM (74)
Contained_in_operonCEOP2060
OrthologWBGene00031696Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00031699Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00031750Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00036824Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00038721Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00038728Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00038733Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00038820Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00038821Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00038822Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00038823Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00038824Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00039292Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00039296Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00039426Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00039431Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00039767Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00039775Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00039776Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00039846Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
WBGene00039847Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
WBGene00040234Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00040548Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00040552Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00040917Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00041960Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00042088Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00042303Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WBGene00042388Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00042557Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00042842Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00042290Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00040214Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00156131Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WBGene00038712Caenorhabditis briggsaeFrom_analysisOMA
WBGene00060784Caenorhabditis remaneiFrom_analysisOMA
WBGene00085402Caenorhabditis remaneiFrom_analysisOMA
WBGene00141180Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00057052Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00057050Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00057051Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00060627Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00068485Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00068484Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00055264Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00072245Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00064457Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00060795Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00060732Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00060791Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00066716Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00067748Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00067747Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00067745Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00085996Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00067744Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00067743Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00147604Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00027293Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00085396Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00060758Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00079289Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00060759Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00070739Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00068073Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00085416Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00054634Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00085385Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00085405Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00085381Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00068074Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00075194Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00079330Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00085379Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00070030Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00080335Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00091340Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00094146Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00112457Pristionchus pacificusFrom_analysisOMA
CSP40.g9261Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_II.g6858Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_01488.g21221Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01773.g23040Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_02290.g25821Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03866.g31474Caenorhabditis sinicaFrom_analysisWormBase-Compara
chrII_pilon.g3559Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (82)
Structured_descriptionAutomated_descriptionEnriched in ABalaaaala; ABalaapaaa; germ line; germline precursor cell; and head mesodermal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; glp-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including Zidovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; TRAF-like; SKP1/BTB/POZ domain superfamily; and BTB/POZ domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF59H6.11
Corresponding_transcriptF59H6.11.1
Other_sequenceCR00540
CRC02056_1
CR09964
Associated_featureWBsf1011665
WBsf222734
Experimental_infoRNAi_resultWBRNAi00082625Inferred_automaticallyRNAi_primary
WBRNAi00061840Inferred_automaticallyRNAi_primary
WBRNAi00033232Inferred_automaticallyRNAi_primary
WBRNAi00049243Inferred_automaticallyRNAi_primary
WBRNAi00082528Inferred_automaticallyRNAi_primary
WBRNAi00016150Inferred_automaticallyRNAi_primary
Expr_patternExpr1025161
Expr1038264
Expr1152983
Expr2009566
Expr2027803
Drives_constructWBCnstr00026033
Construct_productWBCnstr00026033
Microarray_results (14)
Expression_cluster (110)
Interaction (78)
Map_infoMapIIPosition-13.9776Error0.002972
PositivePositive_cloneF59H6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00041771
WBPaper00060694
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene