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WormBase Tree Display for Gene: WBGene00042290

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Name Class

WBGene00042290SMapS_parentSequencecb25.NA_097
IdentityVersion3
NameSequence_nameCBG24099
Molecular_nameCBG24099a
CBG24099a.1
CBP45975
CBG24099b
CBP38203
CBG24099b.1
Other_nameCBG_24099Accession_evidenceNDBHE601225
Public_nameCBG24099
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:12WBPerson1971EventImportedInitial conversion from brigace
224 Jul 2008 11:56:38WBPerson1847EventAcquires_mergeWBGene00042291
331 Aug 2016 10:30:13WBPerson4025EventSplit_intoWBGene00270687
Acquires_mergeWBGene00042291
Split_intoWBGene00270687
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000023.48289From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
6.01444From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.22846From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
7.33198From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
6.57448From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.28022From_analysisRNASeq.briggsae.WBls:0000002.control_median
8.25461From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000310.2983From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
12.7957From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
15.2931From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
13.4939From_analysisRNASeq.briggsae.WBls:0000003.control_mean
14.8903From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000410.0562From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
9.67627From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
9.86623From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
7.21241From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
8.77767From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
9.03467From_analysisRNASeq.briggsae.WBls:0000004.control_mean
9.45079From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.320072From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.594334From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.46293From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.551732From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.641599From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.783392From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.499936From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.894909From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.01553From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1.56848From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.12142From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.32629From_analysisRNASeq.briggsae.WBls:0000038.control_mean
5.27331From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004116.6168From_analysisRNASeq.briggsae.WBls:0000041.control_mean
17.7334From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
18.6252From_analysisRNASeq.briggsae.WBls:0000041.control_median
19.517From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
20.5468From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
8.67003From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
11.2337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
11.6413From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
14.6874From_analysisRNASeq.briggsae.WBls:0000041.control_median
14.8904From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:000006311.3757From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
11.7607From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
8.57217From_analysisRNASeq.briggsae.WBls:0000063.control_mean
9.76904From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
9.95539From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
8.70267From_analysisRNASeq.briggsae.WBls:0000063.control_mean
9.35516From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
9.86222From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001015.27331From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.44345From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.06472From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.79329From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00145452
Ortholog (22)
ParalogWBGene00088703Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in negative regulation of vulval development. Is an ortholog of C. elegans sdz-28 and T25E12.6 and members of the C. elegans bath gene class including bath-15.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG24099a
CBG24099b
Corresponding_CDS_historyCBG24099:bp194
CBG24099:bp255
Corresponding_transcriptCBG24099a.1
CBG24099b.1
Experimental_infoExpr_patternExpr1051754
Microarray_resultsGPL8303_CB6_WBGene00042290_A
GPL8303_CB6_WBGene00042290_B
GPL14143_CBG24099_2211-2270_0.945_1_A
MethodGene