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WormBase Tree Display for Gene: WBGene00039292

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Name Class

WBGene00039292SMapS_parentSequencecb25.fpc4171
IdentityVersion1
NameSequence_nameCBG20266
Molecular_nameCBG20266
CBG20266.1
CBP19826
Other_nameCBG_20266Accession_evidenceNDBHE601190
Public_nameCBG20266
DB_infoDatabaseNDBlocus_tagCBG_20266
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:09WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000212.3242From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
6.80395From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
8.30962From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
9.14592From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.58556From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
7.55679From_analysisRNASeq.briggsae.WBls:0000002.control_median
8.50583From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000037.58595From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
8.4755From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
9.36505From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
11.2417From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
9.39757From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000041.41727From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
2.56767From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
3.71807From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
2.40946From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
2.58385From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
2.79031From_analysisRNASeq.briggsae.WBls:0000004.control_mean
3.82289From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.121371From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.319338From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.836642From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.251639From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.33498From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.381907From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.4976From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.391538From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.769518From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1.45142From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.13333From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.8061From_analysisRNASeq.briggsae.WBls:0000038.control_mean
7.93001From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004134.1646From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
39.5645From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
40.4563From_analysisRNASeq.briggsae.WBls:0000041.control_mean
41.3558From_analysisRNASeq.briggsae.WBls:0000041.control_median
43.147From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
44.949From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
41.3663From_analysisRNASeq.briggsae.WBls:0000041.control_mean
41.8205From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
42.4837From_analysisRNASeq.briggsae.WBls:0000041.control_median
44.5521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006310.9901From_analysisRNASeq.briggsae.WBls:0000063.control_mean
11.2876From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
18.3129From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
7.72962From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
8.61747From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
9.00277From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
10.1452From_analysisRNASeq.briggsae.WBls:0000063.control_median
11.5562From_analysisRNASeq.briggsae.WBls:0000063.control_mean
14.3867From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001016.80395From_analysisRNASeq.briggsae.total_over_all_stages.control_median
9.68591From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
10.7546From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.69476From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (31)
Paralog (78)
Structured_descriptionAutomated_descriptionIs affected by Cbr-htz-1 based on RNA-seq studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; BTB/POZ domain; and SKP1/BTB/POZ domain superfamily. Is an ortholog of C. elegans sdz-28 and members of the C. elegans bath gene class including bath-15.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG20266
Corresponding_CDS_historyCBG20266:bp194
CBG20266:bp255
CBG20266:bp257
Corresponding_transcriptCBG20266.1
Experimental_infoExpr_patternExpr1053125
Microarray_resultsGPL8303_CB6_WBGene00039292_A
GPL8303_CB6_WBGene00039292_B
GPL8303_CB6_WBGene00039292_C
GPL14143_CBG20266_476-535_0.930_1_A
Expression_clusterWBPaper00059178:Cbr-htz-1(gu167)_upregulated
MethodGene