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WormBase Tree Display for Gene: WBGene00042557

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Name Class

WBGene00042557SMapS_parentSequencecb25.NA_159
IdentityVersion2
NameCGC_nameCbr-bath-45.2From_analysisInferred_from_orthology
Sequence_nameCBG24449
Molecular_name (16)
Other_nameCBG_24449Accession_evidenceNDBHE601151
Public_nameCbr-bath-45.2
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:12WBPerson1971EventImportedInitial conversion from brigace
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbr-bath-45.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbath
Allele (29)
RNASeq_FPKMWBls:000000210.2587From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
4.89747From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
7.06822From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
7.40813From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.36466From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
5.98284From_analysisRNASeq.briggsae.WBls:0000002.control_median
6.39726From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.130489From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.820005From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.50952From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.85472From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.924151From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000045.85064From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
6.68162From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
7.51261From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
4.82479From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
6.32562From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
6.53855From_analysisRNASeq.briggsae.WBls:0000004.control_mean
8.1791From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.266889From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
21.2033From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.14568From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
61.1972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
16.5467From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
20.0391From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.34619From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:00000359.17974From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.907415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
11.5739From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
12.9973From_analysisRNASeq.briggsae.WBls:0000038.control_median
14.4207From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
20.9594From_analysisRNASeq.briggsae.WBls:0000038.control_mean
56.9355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000413.37589From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
6.81596From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.18598From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
7.30568From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.42537From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
9.27658From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
7.05206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
7.06724From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.08757From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006316.4798From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
17.3208From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
17.9495From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
20.5606From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
21.7609From_analysisRNASeq.briggsae.WBls:0000063.control_mean
36.4939From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
17.6352From_analysisRNASeq.briggsae.WBls:0000063.control_median
18.9933From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.15545From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010112.5117From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.29332From_analysisRNASeq.briggsae.total_over_all_stages.control_median
11.1395From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.46899From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (39)
Paralog (78)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; TRAF-like; SKP1/BTB/POZ domain superfamily; and BTB/POZ domain. Is an ortholog of C. elegans bath-45.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG24449a
CBG24449b
CBG24449c
CBG24449d
CBG24449e
Corresponding_transcriptCBG24449a.1
CBG24449b.1
CBG24449c.1
CBG24449d.1
CBG24449e.1
CBG24449e.2
Experimental_infoExpr_patternExpr1050918
Microarray_resultsGPL8303_CB6_WBGene00042557_A
GPL8303_CB6_WBGene00042557_B
GPL14143_CBG26714_77-136_0.624_2_A
Expression_clusterWBPaper00051137:Santeuil-virus_upregulated_JU1264
MethodGene