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WormBase Tree Display for Gene: WBGene00018310

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Name Class

WBGene00018310SMapS_parentSequenceF41G4
IdentityVersion2
NameSequence_nameF41G4.7
Molecular_nameF41G4.7
F41G4.7.1
CE53138
Other_nameCELE_F41G4.7Accession_evidenceNDBBX284606
Public_nameF41G4.7
DB_infoDatabaseAceViewgeneXR448
WormQTLgeneWBGene00018310
WormFluxgeneWBGene00018310
NDBlocus_tagCELE_F41G4.7
NCBIgene181732
RefSeqproteinNM_001373616.2
TREEFAMTREEFAM_IDTF322078
TrEMBLUniProtAccQ8WTN3
UniProt_GCRPUniProtAccQ8WTN3
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:00WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
220 May 2019 15:02:40WBPerson4025EventSplit_intoWBGene00304806
Split_intoWBGene00304806
StatusLive
Gene_infoBiotypeSO:0001217
Allele (31)
RNASeq_FPKM (74)
OrthologchrV_pilon.g18060Caenorhabditis elegansFrom_analysisWormBase-Compara
chrX_pilon.g20930Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00008010Caenorhabditis elegansFrom_analysisTreeFam
WBGene00008862Caenorhabditis elegansFrom_analysisTreeFam
WBGene00013832Caenorhabditis elegansFrom_analysisTreeFam
WBGene00017185Caenorhabditis elegansFrom_analysisTreeFam
WBGene00021106Caenorhabditis elegansFrom_analysisTreeFam
Structured_descriptionAutomated_descriptionEnriched in ABplpaappa; ABprpaappa; and outer labial neurons based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including allantoin; Psoralens; and Sirolimus based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF41G4.7
Corresponding_CDS_historyF41G4.7:wp271
Corresponding_transcriptF41G4.7.1
Associated_featureWBsf1008695
WBsf1008696
WBsf1008697
WBsf1008698
WBsf1024888
WBsf1024889
Experimental_infoRNAi_resultWBRNAi00032110Inferred_automaticallyRNAi_primary
WBRNAi00047032Inferred_automaticallyRNAi_primary
WBRNAi00014778Inferred_automaticallyRNAi_primary
Expr_patternExpr1021694
Expr1037888
Expr1150901
Expr2003610
Expr2021828
Drives_constructWBCnstr00026618
Construct_productWBCnstr00026618
Microarray_resultsSMD_F41G4.7
175969_at
Aff_F41G4.7
GPL13394_WBGene00018310
GPL13914_F41G4.7
GPL3518_CE29799
GPL8304_CE_WBGene00018310_A
GPL8673_F41G4_7P01120
GPL9450_F41G4.7
cea2.p.158223
Expression_clusterWBPaper00033065:clk-1(qm30)_upregulated
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
WBPaper00040209:B.thuringiensis_downregulated_MY15
WBPaper00040209:B.thuringiensis_downregulated_MY18
WBPaper00040209:B.thuringiensis_downregulated_N2
WBPaper00044656:tatn-1(qd182)_upregulated
WBPaper00045050:drh-3 (ne4253)_downregulated
WBPaper00045303:ZK1236.1(tm4178)_upregulated
WBPaper00047132:glp-1(ts)-25C_upregulated
WBPaper00048988:neuron_expressed
WBPaper00049098:heat-induced_hrde-1(tm1200)
WBPaper00049098:hrde-1(tm1200)-induced_15C
WBPaper00049098:hrde-1(tm1200)-induced_23C
WBPaper00049098:hrde-1(tm1200)-induced_p15C
WBPaper00049098:hrde-1(tm1200)-repressed_15C
WBPaper00049098:hrde-1(tm1200)-repressed_23C
WBPaper00049098:hrde-1(tm1200)-repressed_p15C
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00050163:let-418(RNAi)_upregulated_100-cell-embryo
WBPaper00050193:met-2(n4256)set-25(n5021)_upregulated_L1
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00051265:F1_hrde-1(tm1200)_upregulated
WBPaper00051265:F1_morc-1(tm6048)_upregulated
WBPaper00051265:F4_hrde-1(tm1200)_upregulated
WBPaper00051305:vit-2(ac3)_downregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053321:mes-4(RNAi)_upregulated_fed-L1_Truseq
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00053888:drh-3(rrr2)_upregulated
WBPaper00055334:DLC-1_interacting
WBPaper00055354:Allantoin_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055941:atfs-1(et15)_upregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056284:ints-5(RNAi)_upregulated
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058711:skn-1(lax188)_upregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059605:mut-16(pk710)_upregulated
WBPaper00060100:SiNP_upregulated_mRNA
WBPaper00060661:sensory-neuron_depleted
WBPaper00061340:Neuroblast_ASH_RIB
WBPaper00061340:OLL
WBPaper00061340:OLQ
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061479:hrde-1(tm1200)_upregulated
WBPaper00061479:mep-1(ne4629)_upregulated
WBPaper00061527:sre-33-ZK1025.1_8337
WBPaper00061653:alh-4(hj221)_downregulated
WBPaper00061995:mter-4(syb3662syb3403)_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064315:mes-3(bn199)_upregulated_EGCs
WBPaper00064315:mes-4(bn73)_upregulated_EGCs
WBPaper00064315:mes-4(bn73)_upregulated_PGCs
WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
WBPaper00064532:pals-22(jy3)_upregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
WBPaper00065258:anchor-cell_depleted
WBPaper00065841:7_1
WBPaper00065841:7_2
WBPaper00065841:7_4
WBPaper00065841:100_0
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00030985:Enterococcus_faecalis_upregulated
WBPaper00030985:Erwinia_carotovora_upregulated
WBPaper00031003:hlh_1_enriched
WBPaper00036286:Pattern_F
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_old
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00041174:genotypic
WBPaper00041174:genotypic_prime
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00048989:eat-2(ad465)_upregulated_in-DMSO
WBPaper00048989:N2_allantoin_upregulated
Map_infoPositivePositive_cloneF41G4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX24.0645
MethodGene