WormBase Tree Display for Gene: WBGene00017501
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WBGene00017501 | SMap | S_parent | Sequence | F15E11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | pud-3 | Person_evidence | WBPerson143 | |||||
Sequence_name | F15E11.15 | ||||||||
Molecular_name | F15E11.15 | ||||||||
F15E11.15.1 | |||||||||
CE33283 | |||||||||
Other_name | CELE_F15E11.15 | Accession_evidence | NDB | BX284605 | |||||
Public_name | pud-3 | ||||||||
DB_info | Database | AceView | gene | 5C802 | |||||
WormQTL | gene | WBGene00017501 | |||||||
WormFlux | gene | WBGene00017501 | |||||||
NDB | locus_tag | CELE_F15E11.15 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00017501|UniProtKB=G5EEV5 | |||||||
family | PTHR31557 | ||||||||
NCBI | gene | 178711 | |||||||
RefSeq | protein | NM_001028634.4 | |||||||
TrEMBL | UniProtAcc | G5EEV5 | |||||||
UniProt_GCRP | UniProtAcc | G5EEV5 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 20 Dec 2012 13:04:39 | WBPerson2970 | Name_change | CGC_name | pud-3 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pud | ||||||||
Allele (27) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (20) | |||||||||
Paralog | WBGene00017490 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WBGene00017498 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00017499 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WBGene00017500 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00021236 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00044489 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00044490 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Expressed in head; hyp7 syncytium; pm3; and rectal gland cell. Is predicted to encode a protein with the following domains: Up-Regulated in long-lived daf-2 and Up-regulated in Daf-2. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F15E11.15 | |||||||
Corresponding_CDS_history | F15E11.15:wp106 | ||||||||
F15E11.15:wp135 | |||||||||
F15E11.15a:wp250 | |||||||||
Corresponding_transcript | F15E11.15.1 | ||||||||
Other_sequence | FD514035.1 | ||||||||
FD517307.1 | |||||||||
CSC00243_1 | |||||||||
CBC04571_1 | |||||||||
FD514343.1 | |||||||||
FD516193.1 | |||||||||
Associated_feature | WBsf233410 | ||||||||
Experimental_info | RNAi_result | WBRNAi00031006 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00097102 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr11082 | ||||||||
Expr1016865 | |||||||||
Expr1148701 | |||||||||
Expr2015181 | |||||||||
Expr2033416 | |||||||||
Drives_construct | WBCnstr00018114 | ||||||||
WBCnstr00018115 | |||||||||
WBCnstr00027251 | |||||||||
Construct_product | WBCnstr00018114 | ||||||||
WBCnstr00027251 | |||||||||
Microarray_results (15) | |||||||||
Expression_cluster (428) | |||||||||
Interaction (16) | |||||||||
Map_info | Map | V | Position | -14.8742 | |||||
Positive | Positive_clone | F15E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00041549 | ||||||||
WBPaper00042533 | |||||||||
WBPaper00057516 | |||||||||
WBPaper00058665 | |||||||||
WBPaper00061938 | |||||||||
WBPaper00065331 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |