WormBase Tree Display for Gene: WBGene00016355
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WBGene00016355 | SMap | S_parent | Sequence | C33F10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | lact-5 | Person_evidence | WBPerson168 | |||||
Sequence_name | C33F10.7 | ||||||||
Molecular_name | C33F10.7a | ||||||||
C33F10.7a.1 | |||||||||
CE04140 | |||||||||
C33F10.7b | |||||||||
CE37751 | |||||||||
C33F10.7b.1 | |||||||||
Other_name | CELE_C33F10.7 | Accession_evidence | NDB | BX284602 | |||||
Public_name | lact-5 | ||||||||
DB_info | Database | AceView | gene | 2F108 | |||||
WormQTL | gene | WBGene00016355 | |||||||
WormFlux | gene | WBGene00016355 | |||||||
NDB | locus_tag | CELE_C33F10.7 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00016355|UniProtKB=Q18384 | |||||||
family | PTHR43319 | ||||||||
NCBI | gene | 183166 | |||||||
RefSeq | protein | NM_001026845.5 | |||||||
NM_001026844.2 | |||||||||
TREEFAM | TREEFAM_ID | TF315291 | |||||||
TrEMBL | UniProtAcc | H2KZ61 | |||||||
Q18384 | |||||||||
UniProt_GCRP | UniProtAcc | Q18384 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 13 Apr 2007 16:02:30 | WBPerson2970 | Name_change | CGC_name | lact-5 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | lact | ||||||||
Allele (44) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (23) | |||||||||
Paralog | WBGene00007358 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00010877 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00010897 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00014164 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00018523 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00000767 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00008410 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00021315 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Concise_description | lact-5 encodes beta-lactamase domain-containing proteins. | Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 18 Dec 2007 00:00:00 | ||||||||
Automated_description | Enriched in several structures, including ABarpaapap; anterior hypodermis; lateral ganglion; rectal epithelium; and sensory neurons based on tiling array; RNA-seq; proteomic; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on microarray and RNA-seq studies. Is affected by nineteen chemicals including 1-methylnicotinamide; 4-bromodiphenyl ether; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Beta-lactamase-related; Beta-lactamase; and Beta-lactamase/transpeptidase-like. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C33F10.7a | |||||||
C33F10.7b | |||||||||
Corresponding_CDS_history | C33F10.7:wp135 | ||||||||
Corresponding_transcript | C33F10.7a.1 | ||||||||
C33F10.7b.1 | |||||||||
Other_sequence (12) | |||||||||
Associated_feature | WBsf987711 | ||||||||
WBsf987712 | |||||||||
WBsf987713 | |||||||||
WBsf1012137 | |||||||||
Experimental_info (7) | |||||||||
Map_info | Map | II | Position | -3.01883 | Error | 0.003464 | |||
Positive | Positive_clone | C33F10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |