WormBase Tree Display for Gene: WBGene00016355
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| WBGene00016355 | SMap | S_parent | Sequence | C33F10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | lact-5 | Person_evidence | WBPerson168 | |||||
| Sequence_name | C33F10.7 | ||||||||
| Molecular_name | C33F10.7a | ||||||||
| C33F10.7a.1 | |||||||||
| CE04140 | |||||||||
| C33F10.7b | |||||||||
| CE37751 | |||||||||
| C33F10.7b.1 | |||||||||
| Other_name | CELE_C33F10.7 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | lact-5 | ||||||||
| DB_info | Database | AceView | gene | 2F108 | |||||
| WormQTL | gene | WBGene00016355 | |||||||
| WormFlux | gene | WBGene00016355 | |||||||
| NDB | locus_tag | CELE_C33F10.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016355|UniProtKB=Q18384 | |||||||
| family | PTHR43319 | ||||||||
| NCBI | gene | 183166 | |||||||
| RefSeq | protein | NM_001026845.5 | |||||||
| NM_001026844.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF315291 | |||||||
| TrEMBL | UniProtAcc | H2KZ61 | |||||||
| Q18384 | |||||||||
| UniProt_GCRP | UniProtAcc | Q18384 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 13 Apr 2007 16:02:30 | WBPerson2970 | Name_change | CGC_name | lact-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lact | ||||||||
| Allele | WBVar01499702 | ||||||||
| WBVar01498435 | |||||||||
| WBVar00171769 | |||||||||
| WBVar00171770 | |||||||||
| WBVar00171771 | |||||||||
| WBVar02017890 | |||||||||
| WBVar02017891 | |||||||||
| WBVar00364888 | |||||||||
| WBVar00364889 | |||||||||
| WBVar00364890 | |||||||||
| WBVar00364891 | |||||||||
| WBVar00364892 | |||||||||
| WBVar00364893 | |||||||||
| WBVar00364894 | |||||||||
| WBVar00364895 | |||||||||
| WBVar00364896 | |||||||||
| WBVar00728262 | |||||||||
| WBVar00728263 | |||||||||
| WBVar00728264 | |||||||||
| WBVar00728265 | |||||||||
| WBVar00728266 | |||||||||
| WBVar00728267 | |||||||||
| WBVar00728268 | |||||||||
| WBVar00728269 | |||||||||
| WBVar00728270 | |||||||||
| WBVar00728271 | |||||||||
| WBVar00728272 | |||||||||
| WBVar01719638 | |||||||||
| WBVar00728273 | |||||||||
| WBVar01719639 | |||||||||
| WBVar00728274 | |||||||||
| WBVar01719640 | |||||||||
| WBVar00728275 | |||||||||
| WBVar01719641 | |||||||||
| WBVar01719642 | |||||||||
| WBVar00728276 | |||||||||
| WBVar00728277 | |||||||||
| WBVar00728278 | |||||||||
| WBVar00728279 | |||||||||
| WBVar00728280 | |||||||||
| WBVar00728281 | |||||||||
| WBVar00728282 | |||||||||
| WBVar01603790 | |||||||||
| WBVar00223034 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (23) | |||||||||
| Paralog | WBGene00007358 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010877 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00010897 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00014164 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018523 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00000767 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00008410 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021315 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | lact-5 encodes beta-lactamase domain-containing proteins. | Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 18 Dec 2007 00:00:00 | ||||||||
| Automated_description | Enriched in several structures, including ABarpaapap; anterior hypodermis; lateral ganglion; rectal epithelium; and sensory neurons based on tiling array; RNA-seq; proteomic; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on microarray and RNA-seq studies. Is affected by nineteen chemicals including 1-methylnicotinamide; 4-bromodiphenyl ether; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Beta-lactamase-related; Beta-lactamase; and Beta-lactamase/transpeptidase-like. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C33F10.7a | |||||||
| C33F10.7b | |||||||||
| Corresponding_CDS_history | C33F10.7:wp135 | ||||||||
| Corresponding_transcript | C33F10.7a.1 | ||||||||
| C33F10.7b.1 | |||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf987711 | ||||||||
| WBsf987712 | |||||||||
| WBsf987713 | |||||||||
| WBsf1012137 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011547 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00041780 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029470 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089001 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019777 | ||||||||
| Expr1037003 | |||||||||
| Expr1145798 | |||||||||
| Expr2012997 | |||||||||
| Expr2031229 | |||||||||
| Drives_construct | WBCnstr00028137 | ||||||||
| Construct_product | WBCnstr00028137 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (159) | |||||||||
| Interaction | WBInteraction000140320 | ||||||||
| WBInteraction000140720 | |||||||||
| WBInteraction000141859 | |||||||||
| WBInteraction000175425 | |||||||||
| WBInteraction000283977 | |||||||||
| WBInteraction000420278 | |||||||||
| WBInteraction000427272 | |||||||||
| Map_info | Map | II | Position | -3.01883 | Error | 0.003464 | |||
| Positive | Positive_clone | C33F10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
