WormBase Tree Display for Gene: WBGene00016061
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WBGene00016061 | SMap | S_parent | Sequence | C24G6 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | hpo-15 | Paper_evidence | WBPaper00038231 | |||
Person_evidence | WBPerson26 | ||||||
Sequence_name | C24G6.6 | ||||||
Molecular_name | C24G6.6 | ||||||
C24G6.6.1 | |||||||
CE17462 | |||||||
C24G6.6.2 | |||||||
C24G6.6.3 | |||||||
Other_name | CELE_C24G6.6 | Accession_evidence | NDB | BX284605 | |||
Public_name | hpo-15 | ||||||
DB_info | Database | AceView | gene | 5F990 | |||
WormQTL | gene | WBGene00016061 | |||||
WormFlux | gene | WBGene00016061 | |||||
NDB | locus_tag | CELE_C24G6.6 | |||||
Panther | gene | CAEEL|WormBase=WBGene00016061|UniProtKB=O76383 | |||||
family | PTHR10742 | ||||||
NCBI | gene | 178934 | |||||
RefSeq | protein | NM_072055.8 | |||||
TREEFAM | TREEFAM_ID | TF318348 | |||||
TrEMBL | UniProtAcc | O76383 | |||||
UniProt_GCRP | UniProtAcc | O76383 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | hpo | ||||||
Allele (56) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00038296 | ||||||
00038297 | |||||||
00121742 | |||||||
Ortholog (45) | |||||||
Paralog | WBGene00000139 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00000137 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00000138 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00005010 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00011615 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00019154 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Predicted to enable polyamine oxidase activity. Human ortholog(s) of this gene implicated in lung non-small cell carcinoma. Is an ortholog of human PAOX (polyamine oxidase) and SMOX (spermine oxidase). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:3908 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20837) | ||
Molecular_info | Corresponding_CDS | C24G6.6 | |||||
Corresponding_transcript | C24G6.6.1 | ||||||
C24G6.6.2 | |||||||
C24G6.6.3 | |||||||
Other_sequence (27) | |||||||
Associated_feature | WBsf652630 | ||||||
WBsf652631 | |||||||
WBsf652632 | |||||||
WBsf233684 | |||||||
Experimental_info | RNAi_result | WBRNAi00091508 | Inferred_automatically | RNAi_primary | |||
WBRNAi00088739 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00029153 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00011120 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00088632 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00041103 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00085294 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00066615 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1020560 | ||||||
Expr1036862 | |||||||
Expr1145138 | |||||||
Expr2012559 | |||||||
Expr2030796 | |||||||
Drives_construct | WBCnstr00028352 | ||||||
Construct_product | WBCnstr00028352 | ||||||
Microarray_results (23) | |||||||
Expression_cluster (252) | |||||||
Interaction (138) | |||||||
Map_info (3) | |||||||
Reference | WBPaper00030371 | ||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
WBPaper00065331 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |