WormBase Tree Display for Gene: WBGene00016061

WBGene00016061 SMap: S_parent: Sequence: C24G6
  Identity: Version: 2
    Name: CGC_name: hpo-15 Paper_evidence: WBPaper00038231
          Person_evidence: WBPerson26
      Sequence_name: C24G6.6
      Molecular_name: C24G6.6
        C24G6.6.1
        CE17462
        C24G6.6.2
        C24G6.6.3
      Other_name: CELE_C24G6.6 Accession_evidence: NDB BX284605
      Public_name: hpo-15
    DB_info: Database: AceView gene 5F990
        WormQTL gene WBGene00016061
        WormFlux gene WBGene00016061
        NDB locus_tag CELE_C24G6.6
        Panther gene CAEEL|WormBase=WBGene00016061|UniProtKB=O76383
          family PTHR10742
        NCBI gene 178934
        RefSeq protein NM_072055.8
        TREEFAM TREEFAM_ID TF318348
        TrEMBL UniProtAcc O76383
        UniProt_GCRP UniProtAcc O76383
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 26 Apr 2011 13:31:47 WBPerson2970 Name_change: CGC_name: hpo-15
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hpo
    Allele (56)
    RNASeq_FPKM (74)
    GO_annotation: 00038296
      00038297
      00121742
    Ortholog (45)
    Paralog: WBGene00000139 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000137 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000138 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00005010 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00011615 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00019154 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable polyamine oxidase activity. Human ortholog(s) of this gene implicated in lung non-small cell carcinoma. Is an ortholog of human PAOX (polyamine oxidase) and SMOX (spermine oxidase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:3908 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:20837)
  Molecular_info: Corresponding_CDS: C24G6.6
    Corresponding_transcript: C24G6.6.1
      C24G6.6.2
      C24G6.6.3
    Other_sequence (27)
    Associated_feature: WBsf652630
      WBsf652631
      WBsf652632
      WBsf233684
  Experimental_info: RNAi_result: WBRNAi00091508 Inferred_automatically: RNAi_primary
      WBRNAi00088739 Inferred_automatically: RNAi_primary
      WBRNAi00029153 Inferred_automatically: RNAi_primary
      WBRNAi00011120 Inferred_automatically: RNAi_primary
      WBRNAi00088632 Inferred_automatically: RNAi_primary
      WBRNAi00041103 Inferred_automatically: RNAi_primary
      WBRNAi00085294 Inferred_automatically: RNAi_primary
      WBRNAi00066615 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1020560
      Expr1036862
      Expr1145138
      Expr2012559
      Expr2030796
    Drives_construct: WBCnstr00028352
    Construct_product: WBCnstr00028352
    Microarray_results (23)
    Expression_cluster (252)
    Interaction: WBInteraction000170013
      WBInteraction000170014
      WBInteraction000170015
      WBInteraction000170016
      WBInteraction000170017
      WBInteraction000170018
      WBInteraction000170019
      WBInteraction000181008
      WBInteraction000195637
      WBInteraction000203745
      WBInteraction000210175
      WBInteraction000211435
      WBInteraction000220986
      WBInteraction000221957
      WBInteraction000224070
      WBInteraction000229733
      WBInteraction000235329
      WBInteraction000241652
      WBInteraction000242041
      WBInteraction000247498
      WBInteraction000250126
      WBInteraction000253063
      WBInteraction000256769
      WBInteraction000256874
      WBInteraction000259335
      WBInteraction000260577
      WBInteraction000263623
      WBInteraction000265871
      WBInteraction000266469
      WBInteraction000268844
      WBInteraction000277729
      WBInteraction000279156
      WBInteraction000281524
      WBInteraction000281924
      WBInteraction000282116
      WBInteraction000286501
      WBInteraction000296637
      WBInteraction000302619
      WBInteraction000302913
      WBInteraction000307300
      WBInteraction000311934
      WBInteraction000314633
      WBInteraction000314800
      WBInteraction000315340
      WBInteraction000317514
      WBInteraction000318124
      WBInteraction000322122
      WBInteraction000324112
      WBInteraction000324990
      WBInteraction000328235
      WBInteraction000334359
      WBInteraction000336668
      WBInteraction000338734
      WBInteraction000343008
      WBInteraction000343465
      WBInteraction000346452
      WBInteraction000348516
      WBInteraction000349038
      WBInteraction000353546
      WBInteraction000355072
      WBInteraction000355895
      WBInteraction000356112
      WBInteraction000357674
      WBInteraction000360696
      WBInteraction000362795
      WBInteraction000363102
      WBInteraction000363129
      WBInteraction000363355
      WBInteraction000364487
      WBInteraction000365605
      WBInteraction000366027
      WBInteraction000366313
      WBInteraction000366416
      WBInteraction000366984
      WBInteraction000367677
      WBInteraction000368522
      WBInteraction000370670
      WBInteraction000371281
      WBInteraction000372678
      WBInteraction000377360
      WBInteraction000378585
      WBInteraction000380756
      WBInteraction000382066
      WBInteraction000383365
      WBInteraction000384770
      WBInteraction000384802
      WBInteraction000389333
      WBInteraction000390275
      WBInteraction000390496
      WBInteraction000390716
      WBInteraction000390896
      WBInteraction000391443
      WBInteraction000397388
      WBInteraction000398205
      WBInteraction000398641
      WBInteraction000400190
      WBInteraction000400537
      WBInteraction000400802
      WBInteraction000403293
      WBInteraction000403360
      WBInteraction000404237
      WBInteraction000406312
      WBInteraction000407203
      WBInteraction000408307
      WBInteraction000408460
      WBInteraction000409549
      WBInteraction000411932
      WBInteraction000412166
      WBInteraction000412574
      WBInteraction000417468
      WBInteraction000419543
      WBInteraction000420637
      WBInteraction000420638
      WBInteraction000423029
      WBInteraction000425340
      WBInteraction000426805
      WBInteraction000427395
      WBInteraction000428923
      WBInteraction000430636
      WBInteraction000430673
      WBInteraction000433757
      WBInteraction000434837
      WBInteraction000435803
      WBInteraction000436432
      WBInteraction000439634
      WBInteraction000439928
      WBInteraction000440519
      WBInteraction000441207
      WBInteraction000443559
      WBInteraction000443744
      WBInteraction000450049
      WBInteraction000450642
      WBInteraction000452366
      WBInteraction000453075
      WBInteraction000458474
      WBInteraction000461771
      WBInteraction000543544
      WBInteraction000579538
  Map_info: Map: V Position: -1.74087 Error: 0.007229
    Positive: Positive_clone: C24G6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00030371
    WBPaper00038491
    WBPaper00055090
    WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene