WormBase Tree Display for Gene: WBGene00016061
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| WBGene00016061 | SMap | S_parent | Sequence | C24G6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | hpo-15 | Paper_evidence | WBPaper00038231 | |||||
| Person_evidence | WBPerson26 | ||||||||
| Sequence_name | C24G6.6 | ||||||||
| Molecular_name | C24G6.6 | ||||||||
| C24G6.6.1 | |||||||||
| CE17462 | |||||||||
| C24G6.6.2 | |||||||||
| C24G6.6.3 | |||||||||
| Other_name | CELE_C24G6.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | hpo-15 | ||||||||
| DB_info | Database | AceView | gene | 5F990 | |||||
| WormQTL | gene | WBGene00016061 | |||||||
| WormFlux | gene | WBGene00016061 | |||||||
| NDB | locus_tag | CELE_C24G6.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016061|UniProtKB=O76383 | |||||||
| family | PTHR10742 | ||||||||
| NCBI | gene | 178934 | |||||||
| RefSeq | protein | NM_072055.8 | |||||||
| TREEFAM | TREEFAM_ID | TF318348 | |||||||
| TrEMBL | UniProtAcc | O76383 | |||||||
| UniProt_GCRP | UniProtAcc | O76383 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 26 Apr 2011 13:31:47 | WBPerson2970 | Name_change | CGC_name | hpo-15 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hpo | ||||||||
| Allele | WBVar01499528 | ||||||||
| WBVar01459949 | |||||||||
| WBVar01499740 | |||||||||
| WBVar00308214 | |||||||||
| WBVar01500129 | |||||||||
| WBVar01012604 | |||||||||
| WBVar01012605 | |||||||||
| WBVar01012606 | |||||||||
| WBVar01012607 | |||||||||
| WBVar01012608 | |||||||||
| WBVar01012609 | |||||||||
| WBVar01012610 | |||||||||
| WBVar01012611 | |||||||||
| WBVar01588263 | |||||||||
| WBVar01012612 | |||||||||
| WBVar01012613 | |||||||||
| WBVar01012614 | |||||||||
| WBVar01012615 | |||||||||
| WBVar01012616 | |||||||||
| WBVar01012617 | |||||||||
| WBVar01012618 | |||||||||
| WBVar01012619 | |||||||||
| WBVar01012620 | |||||||||
| WBVar01012621 | |||||||||
| WBVar01012622 | |||||||||
| WBVar01012623 | |||||||||
| WBVar01012624 | |||||||||
| WBVar01012625 | |||||||||
| WBVar01808010 | |||||||||
| WBVar00458587 | |||||||||
| WBVar00458588 | |||||||||
| WBVar00458589 | |||||||||
| WBVar01500006 | |||||||||
| WBVar00458590 | |||||||||
| WBVar01500007 | |||||||||
| WBVar00458591 | |||||||||
| WBVar00458592 | |||||||||
| WBVar00458593 | |||||||||
| WBVar00458594 | |||||||||
| WBVar00458595 | |||||||||
| WBVar00458596 | |||||||||
| WBVar00458597 | |||||||||
| WBVar01651591 | |||||||||
| WBVar00458598 | |||||||||
| WBVar01651592 | |||||||||
| WBVar01651593 | |||||||||
| WBVar01973499 | |||||||||
| WBVar01973500 | |||||||||
| WBVar01842335 | |||||||||
| WBVar01842336 | |||||||||
| WBVar01740250 | |||||||||
| WBVar01842337 | |||||||||
| WBVar01499496 | |||||||||
| WBVar01499316 | |||||||||
| WBVar02145187 | |||||||||
| WBVar01500066 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00038296 | ||||||||
| 00038297 | |||||||||
| 00121742 | |||||||||
| Ortholog (45) | |||||||||
| Paralog | WBGene00000139 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00000137 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00000138 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00005010 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00011615 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019154 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable polyamine oxidase activity. Human ortholog(s) of this gene implicated in lung non-small cell carcinoma. Is an ortholog of human PAOX (polyamine oxidase) and SMOX (spermine oxidase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:3908 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20837) | ||||
| Molecular_info | Corresponding_CDS | C24G6.6 | |||||||
| Corresponding_transcript | C24G6.6.1 | ||||||||
| C24G6.6.2 | |||||||||
| C24G6.6.3 | |||||||||
| Other_sequence (27) | |||||||||
| Associated_feature | WBsf652630 | ||||||||
| WBsf652631 | |||||||||
| WBsf652632 | |||||||||
| WBsf233684 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00091508 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00088739 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029153 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011120 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00088632 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041103 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085294 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00066615 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020560 | ||||||||
| Expr1036862 | |||||||||
| Expr1145138 | |||||||||
| Expr2012559 | |||||||||
| Expr2030796 | |||||||||
| Drives_construct | WBCnstr00028352 | ||||||||
| Construct_product | WBCnstr00028352 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (252) | |||||||||
| Interaction (138) | |||||||||
| Map_info | Map | V | Position | -1.74087 | Error | 0.007229 | |||
| Positive | Positive_clone | C24G6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00030371 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
