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WormBase Tree Display for Gene: WBGene00016048

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Name Class

WBGene00016048SMapS_parentSequenceC24B9
IdentityVersion1
NameSequence_nameC24B9.3
Molecular_nameC24B9.3
C24B9.3.1
CE29672
Other_nameCELE_C24B9.3Accession_evidenceNDBBX284605
Public_nameC24B9.3
DB_infoDatabaseAceViewgene5D186
WormQTLgeneWBGene00016048
WormFluxgeneWBGene00016048
NDBlocus_tagCELE_C24B9.3
PanthergeneCAEEL|WormBase=WBGene00016048|UniProtKB=O76430
familyPTHR31024
NCBIgene178736
RefSeqproteinNM_001028500.8
TrEMBLUniProtAccO76430
UniProt_GCRPUniProtAccO76430
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (147)
RNASeq_FPKM (74)
OrthologWBGene00062115Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00028891Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00153562Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00192874Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00142979Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00164704Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00125262Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00051402Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00068952Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00068315Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00134114Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00138681Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g1335Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g11634Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g15547Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g10276Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g10672Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g15101Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g20255Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g10183Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g16743Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g6294Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g2710Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00234.g7564Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_09041.g21847Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-C24B9.3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g7664Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00112.g4659Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_15243Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_019086Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04611Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g18014Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50052400Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g13529Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00259855Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00007800Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00015865Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00015993Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000853Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00003482Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00003497Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017965Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019570Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020579Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021343Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in head mesodermal cell and intestine based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; proteomic; and RNA-seq studies. Is affected by nineteen chemicals including methylmercuric chloride; stavudine; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: von Willebrand factor A-like domain superfamily; von Willebrand factor, type A; and von Willebrand factor type A domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC24B9.3
Corresponding_CDS_historyC24B9.3b:wp250
Corresponding_transcriptC24B9.3.1
Other_sequenceCJC05813_1
GW915785.1
CJC06135_1
MH04650
CBC00706_1
Associated_featureWBsf652513
WBsf999533
WBsf1019314
WBsf233427
Experimental_infoRNAi_resultWBRNAi00011096Inferred_automaticallyRNAi_primary
WBRNAi00029137Inferred_automaticallyRNAi_primary
WBRNAi00041077Inferred_automaticallyRNAi_primary
WBRNAi00007372Inferred_automaticallyRNAi_primary
Expr_patternExpr1022009
Expr1145113
Expr2001037
Expr2019255
Microarray_results (22)
Expression_cluster (227)
InteractionWBInteraction000313010
WBInteraction000325438
WBInteraction000383568
WBInteraction000395998
WBInteraction000401514
WBInteraction000422630
Map_infoPositivePositive_cloneC24B9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV-13.3
ReferenceWBPaper00041771
WBPaper00064623
MethodGene