WormBase Tree Display for Gene: WBGene00015596
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| WBGene00015596 | SMap | S_parent | Sequence | C08E3 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | fbxa-161 | Person_evidence | WBPerson655 | ||||||
| Sequence_name | C08E3.4 | |||||||||
| Molecular_name | C08E3.4 | |||||||||
| Other_name | CELE_C08E3.4 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | fbxa-161 | |||||||||
| DB_info | Database | AceView | gene | 2B898 | ||||||
| WormQTL | gene | WBGene00015596 | ||||||||
| WormFlux | gene | WBGene00015596 | ||||||||
| NDB | locus_tag | CELE_C08E3.4 | ||||||||
| NCBI | gene | 173534 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 01 Mar 2007 11:55:18 | WBPerson2970 | Name_change | CGC_name | fbxa-161 | |||||
| 3 | 30 Jun 2014 14:06:06 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | fbxa | |||||||||
| Allele (87) | ||||||||||
| Strain | WBStrain00033274 | |||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00080375 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| WBGene00084134 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||||
| WBGene00085145 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||||
| WBGene00078863 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||||
| Paralog | WBGene00009427 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| WBGene00009709 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||||
| WBGene00011513 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||||
| WBGene00015598 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||||
| WBGene00015599 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||||
| WBGene00015601 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||||
| WBGene00015604 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||||
| WBGene00020304 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||||
| Structured_description | Automated_description | Enriched in intestine based on microarray studies. Is affected by several genes including daf-16; daf-2; and hsf-1 based on microarray; tiling array; and RNA-seq studies. Is affected by eleven chemicals including tryptophan; methylmercuric chloride; and Tunicamycin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C08E3.4:wp87 | ||||||||
| Corresponding_pseudogene | C08E3.4 | |||||||||
| Associated_feature | WBsf222703 | |||||||||
| Experimental_info | Expr_pattern | Expr1014046 | ||||||||
| Expr1144162 | ||||||||||
| Microarray_results (13) | ||||||||||
| Expression_cluster (95) | ||||||||||
| Interaction (77) | ||||||||||
| Map_info | Map | II | Position | -15.3384 | Error | 0.005236 | ||||
| Positive | Positive_clone | C08E3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
