WormBase Tree Display for Gene: WBGene00015601
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WBGene00015601 | SMap | S_parent | Sequence | C08E3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | fbxa-166 | Person_evidence | WBPerson655 | |||||
Sequence_name | C08E3.9 | ||||||||
Molecular_name | C08E3.9 | ||||||||
C08E3.9.1 | |||||||||
CE39129 | |||||||||
Other_name | CELE_C08E3.9 | Accession_evidence | NDB | BX284602 | |||||
Public_name | fbxa-166 | ||||||||
DB_info | Database | AceView | gene | 2B910 | |||||
WormQTL | gene | WBGene00015601 | |||||||
WormFlux | gene | WBGene00015601 | |||||||
NDB | locus_tag | CELE_C08E3.9 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00015601|UniProtKB=O17200 | |||||||
family | PTHR23015 | ||||||||
NCBI | gene | 182401 | |||||||
RefSeq | protein | NM_061613.5 | |||||||
TREEFAM | TREEFAM_ID | TF321294 | |||||||
TrEMBL | UniProtAcc | O17200 | |||||||
UniProt_GCRP | UniProtAcc | O17200 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 01 Mar 2007 11:55:18 | WBPerson2970 | Name_change | CGC_name | fbxa-166 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | fbxa | ||||||||
Allele (89) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00029435 | ||||||||
00029436 | |||||||||
Contained_in_operon | CEOP2763 | ||||||||
Ortholog (23) | |||||||||
Paralog (222) | |||||||||
Structured_description | Automated_description | Enriched in intestine and pharynx based on tiling array and RNA-seq studies. Is affected by several genes including skn-1; hsf-1; and rrf-3 based on microarray; tiling array; and RNA-seq studies. Is affected by thirteen chemicals including hydrogen sulfide; methylmercury hydroxide; and methylmercuric chloride based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Mos1 transposase, HTH domain; FTH domain; HTH domain in Mos1 transposase; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C08E3.9 | |||||||
Corresponding_CDS_history | C08E3.9:wp149 | ||||||||
Corresponding_transcript | C08E3.9.1 | ||||||||
Associated_feature | WBsf222705 | ||||||||
Experimental_info | RNAi_result | WBRNAi00028675 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00010453 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00040099 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1144167 | ||||||||
Expr2011492 | |||||||||
Expr2029729 | |||||||||
Drives_construct | WBCnstr00028722 | ||||||||
Construct_product | WBCnstr00028722 | ||||||||
Microarray_results (13) | |||||||||
Expression_cluster (176) | |||||||||
Interaction (13) | |||||||||
Map_info | Map | II | Position | -15.2397 | Error | 0.010825 | |||
Positive | Positive_clone | C08E3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |