WormBase Tree Display for Gene: WBGene00011513
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| WBGene00011513 | SMap | S_parent | Sequence | T06C12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-197 | Person_evidence | WBPerson655 | |||||
| Sequence_name | T06C12.4 | ||||||||
| Molecular_name | T06C12.4 | ||||||||
| T06C12.4.1 | |||||||||
| CE16354 | |||||||||
| Other_name | CELE_T06C12.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | fbxa-197 | ||||||||
| DB_info | Database | AceView | gene | 5Q345 | |||||
| WormQTL | gene | WBGene00011513 | |||||||
| WormFlux | gene | WBGene00011513 | |||||||
| NDB | locus_tag | CELE_T06C12.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011513|UniProtKB=O18043 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 188165 | |||||||
| RefSeq | protein | NM_074562.4 | |||||||
| TREEFAM | TREEFAM_ID | TF321294 | |||||||
| TrEMBL | UniProtAcc | O18043 | |||||||
| UniProt_GCRP | UniProtAcc | O18043 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 01 Mar 2007 11:55:19 | WBPerson2970 | Name_change | CGC_name | fbxa-197 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (30) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP5535 | ||||||||
| Ortholog (34) | |||||||||
| Paralog (222) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including I5 neuron; cholinergic neurons; germ line; germline precursor cell; and head mesodermal cell based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including methylmercuric chloride; manganese chloride; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Mos1 transposase, HTH domain; FTH domain; HTH domain in Mos1 transposase; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T06C12.4 | |||||||
| Corresponding_transcript | T06C12.4.1 | ||||||||
| Other_sequence | CBC01996_1 | ||||||||
| CBC02683_1 | |||||||||
| Associated_feature | WBsf662137 | ||||||||
| WBsf233052 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052628 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00062357 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035257 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018281 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026732 | ||||||||
| Expr1156233 | |||||||||
| Expr2011511 | |||||||||
| Expr2029748 | |||||||||
| Drives_construct | WBCnstr00030597 | ||||||||
| Construct_product | WBCnstr00030597 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (105) | |||||||||
| Interaction (58) | |||||||||
| Map_info | Map | V | Position | 9.02871 | Error | 0.002877 | |||
| Positive | Positive_clone | T06C12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
