WormBase Tree Display for Gene: WBGene00015604
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| WBGene00015604 | SMap | S_parent | Sequence | C08E3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-160 | Person_evidence | WBPerson655 | |||||
| Sequence_name | C08E3.12 | ||||||||
| Molecular_name | C08E3.12 | ||||||||
| C08E3.12.1 | |||||||||
| CE08015 | |||||||||
| Other_name | CELE_C08E3.12 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | fbxa-160 | ||||||||
| DB_info | Database | AceView | gene | 2B916 | |||||
| WormQTL | gene | WBGene00015604 | |||||||
| WormFlux | gene | WBGene00015604 | |||||||
| NDB | locus_tag | CELE_C08E3.12 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015604|UniProtKB=O17203 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 182404 | |||||||
| RefSeq | protein | NM_061616.1 | |||||||
| TREEFAM | TREEFAM_ID | TF322006 | |||||||
| TrEMBL | UniProtAcc | O17203 | |||||||
| UniProt_GCRP | UniProtAcc | O17203 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 01 Mar 2007 11:55:18 | WBPerson2970 | Name_change | CGC_name | fbxa-160 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (68) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (19) | |||||||||
| Paralog (218) | |||||||||
| Structured_description | Automated_description | Is affected by several genes including lin-35; lin-15B; and rsr-2 based on microarray; tiling array; and RNA-seq studies. Is affected by resveratrol and copper sulfate based on microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C08E3.12 | |||||||
| Corresponding_transcript | C08E3.12.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00010444 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1015049 | ||||||||
| Expr1144156 | |||||||||
| Drives_construct | WBCnstr00028720 | ||||||||
| Construct_product | WBCnstr00028720 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (13) | |||||||||
| Interaction | WBInteraction000118757 | ||||||||
| WBInteraction000136013 | |||||||||
| WBInteraction000180014 | |||||||||
| WBInteraction000215021 | |||||||||
| WBInteraction000218967 | |||||||||
| WBInteraction000303306 | |||||||||
| WBInteraction000346457 | |||||||||
| Map_info | Map | II | Position | -15.1659 | Error | 0.008771 | |||
| Positive | Positive_clone | C08E3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
