WormBase Tree Display for Gene: WBGene00015599

WBGene00015599 SMap: S_parent: Sequence: C08E3
  Identity: Version: 2
    Name: CGC_name: fbxa-164 Person_evidence: WBPerson655
      Sequence_name: C08E3.7
      Molecular_name: C08E3.7
        C08E3.7.1
        CE08010
      Other_name: CELE_C08E3.7 Accession_evidence: NDB BX284602
      Public_name: fbxa-164
    DB_info: Database: AceView gene 2B906
        WormQTL gene WBGene00015599
        WormFlux gene WBGene00015599
        NDB locus_tag CELE_C08E3.7
        Panther gene CAEEL|WormBase=WBGene00015599|UniProtKB=O17198
          family PTHR23015
        NCBI gene 182399
        RefSeq protein NM_061611.6
        TREEFAM TREEFAM_ID TF321294
        TrEMBL UniProtAcc O17198
        UniProt_GCRP UniProtAcc O17198
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 01 Mar 2007 11:55:18 WBPerson2970 Name_change: CGC_name: fbxa-164
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (129)
    RNASeq_FPKM (74)
    GO_annotation: 00029434
    Ortholog (20)
    Paralog (222)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in intestine based on RNA-seq and microarray studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; tiling array; and RNA-seq studies. Is affected by eighteen chemicals including aldicarb; Tunicamycin; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C08E3.7
    Corresponding_transcript: C08E3.7.1
  Experimental_info: RNAi_result: WBRNAi00028673 Inferred_automatically: RNAi_primary
      WBRNAi00040096 Inferred_automatically: RNAi_primary
      WBRNAi00040097 Inferred_automatically: RNAi_primary
      WBRNAi00010451 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022431
      Expr1144165
    Drives_construct: WBCnstr00028724
    Construct_product: WBCnstr00028724
    Microarray_results (16)
    Expression_cluster (143)
    Interaction (33)
  Map_info: Map: II Position: -15.2875 Error: 0.006893
    Positive: Positive_clone: C08E3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene