WormBase Tree Display for Gene: WBGene00015523
expand all nodes | collapse all nodes | view schema
WBGene00015523 | SMap | S_parent | Sequence | C06E1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | ztf-30 | Person_evidence | WBPerson260 | |||||
WBPerson1997 | |||||||||
Sequence_name | C06E1.8 | ||||||||
Molecular_name | C06E1.8 | ||||||||
C06E1.8.1 | |||||||||
CE00063 | |||||||||
Other_name | CELE_C06E1.8 | Accession_evidence | NDB | BX284603 | |||||
Public_name | ztf-30 | ||||||||
DB_info | Database | AceView | gene | 3J686 | |||||
WormQTL | gene | WBGene00015523 | |||||||
WormFlux | gene | WBGene00015523 | |||||||
NDB | locus_tag | CELE_C06E1.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00015523|UniProtKB=P34303 | |||||||
family | PTHR24408 | ||||||||
NCBI | gene | 182317 | |||||||
RefSeq | protein | NM_066491.5 | |||||||
SwissProt | UniProtAcc | P34303 | |||||||
TREEFAM | TREEFAM_ID | TF317235 | |||||||
UniProt_GCRP | UniProtAcc | P34303 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 16 Apr 2010 14:03:06 | WBPerson2970 | Name_change | CGC_name | ztf-30 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ztf | ||||||||
Allele (44) | |||||||||
Strain | WBStrain00037257 | ||||||||
WBStrain00037498 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00041491 | ||||||||
00041492 | |||||||||
00041493 | |||||||||
00041494 | |||||||||
00041495 | |||||||||
00041496 | |||||||||
00041497 | |||||||||
00041498 | |||||||||
Ortholog (26) | |||||||||
Paralog | WBGene00000468 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00001821 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
WBGene00006492 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00009834 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00011066 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00011505 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00012405 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00013438 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00013734 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00014131 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00019299 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00044068 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00044386 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00018099 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00019960 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00016154 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00016713 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C06E1.8 | |||||||
Corresponding_transcript | C06E1.8.1 | ||||||||
Other_sequence | ACC25399_1 | ||||||||
EX539676.1 | |||||||||
CJC13736_1 | |||||||||
Associated_feature (13) | |||||||||
Transcription_factor | WBTranscriptionFactor000483 | ||||||||
Experimental_info | RNAi_result | WBRNAi00005468 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00010307 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00039897 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1024575 | ||||||||
Expr1036645 | |||||||||
Expr1143974 | |||||||||
Expr1200328 | |||||||||
Expr2018201 | |||||||||
Expr2036339 | |||||||||
Drives_construct | WBCnstr00028780 | ||||||||
Construct_product | WBCnstr00016783 | ||||||||
WBCnstr00028780 | |||||||||
Microarray_results (18) | |||||||||
Expression_cluster (167) | |||||||||
Interaction (37) | |||||||||
Map_info | Map | III | Position | -0.229 | Error | 0.002397 | |||
Positive | Positive_clone | C06E1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00027309 | ||||||||
WBPaper00061738 | |||||||||
WBPaper00063926 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |