WormBase Tree Display for Gene: WBGene00015332

WBGene00015332 SMap: S_parent: Sequence: C02C2
  Identity: Version: 2
    Name: CGC_name: tyr-1 Person_evidence: WBPerson69
      Sequence_name: C02C2.1
      Molecular_name: C02C2.1
        C02C2.1.1
        CE06754
      Other_name: CELE_C02C2.1 Accession_evidence: NDB BX284603
      Public_name: tyr-1
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 11 Feb 2005 11:34:52 WBPerson2970 Name_change: CGC_name: tyr-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tyr
    Allele (34)
    Strain: WBStrain00032008
    RNASeq_FPKM (74)
    GO_annotation: 00041196
      00041197
      00041198
      00041199
      00121250
    Ortholog: WBGene00071540 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00033244 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00033245 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
      WBGene00090499 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00126152 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00194162 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00222166 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g5998 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g4513 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g8015 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g7453 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g3141 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g18247 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g7644 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g3805 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g20514 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g2571 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1045 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00401.g10331 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_06191.g20120 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-tyr-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold615.g5982 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_05337.g34820 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_09268.g39346 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_21101 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_24741 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_009088 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g03980 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g20359 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30043300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8241 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00208251 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00244691 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00261671 Strongyloides ratti From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-991026-3 Danio rerio From_analysis: Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      ZFIN:ZDB-GENE-000508-1 Danio rerio From_analysis: Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      ZFIN:ZDB-GENE-040718-249 Danio rerio From_analysis: Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      ZFIN:ZDB-GENE-070718-2 Danio rerio From_analysis: Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:2709 Homo sapiens From_analysis: Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:12442 Homo sapiens From_analysis: Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:12450 Homo sapiens From_analysis: Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      MGI:98880 Mus musculus From_analysis: Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1593266 Rattus norvegicus From_analysis: OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:1589755 Rattus norvegicus From_analysis: OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
    Paralog: WBGene00009001 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00010060 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00010661 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00021553 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00016419 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00022231 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00017483 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Concise_description: C02C2.1 encodes a tyrosinase homolog with a glutamine/asparagine-rich domain. Paper_evidence: WBPaper00005068
            WBPaper00012788
            WBPaper00012830
            WBPaper00012882
            WBPaper00012897
            WBPaper00013003
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable metal ion binding activity and monooxygenase activity. Human ortholog(s) of this gene implicated in several diseases, including ocular albinism 1; oculocutaneous albinism (multiple); and vitiligo. Is an ortholog of human DCT (dopachrome tautomerase) and TYR (tyrosinase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0050633 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12442)
      DOID:8465 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12442)
      DOID:0070097 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12450)
      DOID:8923 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12442)
      DOID:0050632 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12442,HGNC:12450,HGNC:2709)
      DOID:12306 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12442)
      DOID:0070095 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12442)
      DOID:0070094 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12442)
      DOID:1909 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12442)
      DOID:10123 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12442,HGNC:12450)
  Molecular_info: Corresponding_CDS: C02C2.1
    Corresponding_transcript: C02C2.1.1
    Other_sequence (31)
    Associated_feature: WBsf993180
      WBsf993181
      WBsf993182
      WBsf993183
      WBsf1015330
      WBsf225291
      WBsf225292
      WBsf225293
      WBsf225294
  Experimental_info: RNAi_result: WBRNAi00098213 Inferred_automatically: RNAi_primary
      WBRNAi00039406 Inferred_automatically: RNAi_primary
      WBRNAi00028334 Inferred_automatically: RNAi_primary
      WBRNAi00098217 Inferred_automatically: RNAi_primary
      WBRNAi00005452 Inferred_automatically: RNAi_primary
      WBRNAi00007421 Inferred_automatically: RNAi_primary
      WBRNAi00009978 Inferred_automatically: RNAi_primary
      WBRNAi00039403 Inferred_automatically: RNAi_primary
      WBRNAi00005197 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1020752
      Expr1143519
      Expr2017685
      Expr2035823
    Drives_construct: WBCnstr00028927
    Construct_product: WBCnstr00028927
    Microarray_results (19)
    Expression_cluster (186)
    Interaction (17)
  Map_info (4)
  Reference: WBPaper00011697
    WBPaper00022302
    WBPaper00038491
    WBPaper00044177
    WBPaper00055090
    WBPaper00061115
    WBPaper00065140
  Picture: WBPicture0000013093
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene