WormBase Tree Display for Gene: WBGene00015332
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WBGene00015332 | SMap | S_parent | Sequence | C02C2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | tyr-1 | Person_evidence | WBPerson69 | |||||
Sequence_name | C02C2.1 | ||||||||
Molecular_name | C02C2.1 | ||||||||
C02C2.1.1 | |||||||||
CE06754 | |||||||||
Other_name | CELE_C02C2.1 | Accession_evidence | NDB | BX284603 | |||||
Public_name | tyr-1 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 11 Feb 2005 11:34:52 | WBPerson2970 | Name_change | CGC_name | tyr-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | tyr | ||||||||
Allele (34) | |||||||||
Strain | WBStrain00032008 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00041196 | ||||||||
00041197 | |||||||||
00041198 | |||||||||
00041199 | |||||||||
00121250 | |||||||||
Ortholog (44) | |||||||||
Paralog | WBGene00009001 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00010060 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00010661 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00021553 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00016419 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00022231 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00017483 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Concise_description | C02C2.1 encodes a tyrosinase homolog with a glutamine/asparagine-rich domain. | Paper_evidence | WBPaper00005068 | |||||
WBPaper00012788 | |||||||||
WBPaper00012830 | |||||||||
WBPaper00012882 | |||||||||
WBPaper00012897 | |||||||||
WBPaper00013003 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable metal ion binding activity and monooxygenase activity. Human ortholog(s) of this gene implicated in several diseases, including ocular albinism 1; oculocutaneous albinism (multiple); and vitiligo. Is an ortholog of human DCT (dopachrome tautomerase) and TYR (tyrosinase). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0050633 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||
DOID:8465 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
DOID:0070097 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12450) | ||||||
DOID:8923 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
DOID:0050632 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442,HGNC:12450,HGNC:2709) | ||||||
DOID:12306 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
DOID:0070095 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
DOID:0070094 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
DOID:1909 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
DOID:10123 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442,HGNC:12450) | ||||||
Molecular_info | Corresponding_CDS | C02C2.1 | |||||||
Corresponding_transcript | C02C2.1.1 | ||||||||
Other_sequence (31) | |||||||||
Associated_feature | WBsf993180 | ||||||||
WBsf993181 | |||||||||
WBsf993182 | |||||||||
WBsf993183 | |||||||||
WBsf1015330 | |||||||||
WBsf225291 | |||||||||
WBsf225292 | |||||||||
WBsf225293 | |||||||||
WBsf225294 | |||||||||
Experimental_info | RNAi_result | WBRNAi00098213 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00039406 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00028334 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00098217 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00005452 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00007421 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00009978 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00039403 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00005197 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1020752 | ||||||||
Expr1143519 | |||||||||
Expr2017685 | |||||||||
Expr2035823 | |||||||||
Drives_construct | WBCnstr00028927 | ||||||||
Construct_product | WBCnstr00028927 | ||||||||
Microarray_results | SMD_C02C2.1 | ||||||||
189065_at | |||||||||
A_12_P109998 | |||||||||
Aff_C02C2.1 | |||||||||
GPL13394_WBGene00015332 | |||||||||
GPL13914_C02C2.1 | |||||||||
GPL14144_C02C2.1_1134-1193_0.918_5_B | |||||||||
GPL14144_C02C2.1_1459-1518_0.927_2_A | |||||||||
GPL14144_C02C2.1_1647-1706_0.907_9_C | |||||||||
GPL19516_CGZ0001961 | |||||||||
GPL21109_C02C2.1 | |||||||||
GPL3518_CE06754 | |||||||||
GPL8304_CE_WBGene00015332_A | |||||||||
GPL8304_CE_WBGene00015332_B | |||||||||
GPL8673_C02C2_1P00822 | |||||||||
GPL8673_C02C2_1P01209 | |||||||||
GPL8673_C02C2_1P01568 | |||||||||
GPL9450_C02C2.1 | |||||||||
cea2.p.55680 | |||||||||
Expression_cluster (186) | |||||||||
Interaction | WBInteraction000031957 | ||||||||
WBInteraction000118665 | |||||||||
WBInteraction000118666 | |||||||||
WBInteraction000118667 | |||||||||
WBInteraction000118668 | |||||||||
WBInteraction000123455 | |||||||||
WBInteraction000123456 | |||||||||
WBInteraction000123457 | |||||||||
WBInteraction000218227 | |||||||||
WBInteraction000288427 | |||||||||
WBInteraction000407012 | |||||||||
WBInteraction000428010 | |||||||||
WBInteraction000504185 | |||||||||
WBInteraction000515635 | |||||||||
WBInteraction000543947 | |||||||||
WBInteraction000550693 | |||||||||
WBInteraction000556627 | |||||||||
Map_info | Map | III | Position | -0.517852 | Error | 0.006315 | |||
Positive | Positive_clone | C02C2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5055 | |||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00011697 | ||||||||
WBPaper00022302 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00044177 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00061115 | |||||||||
WBPaper00065140 | |||||||||
Picture | WBPicture0000013093 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |