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WormBase Tree Display for Gene: WBGene00015007

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Name Class

WBGene00015007SMapS_parentSequenceB0041
IdentityVersion2
NameCGC_nameain-2Paper_evidenceWBPaper00031252
Person_evidenceWBPerson237
Sequence_nameB0041.2
Molecular_name (22)
Other_nameCELE_B0041.2Accession_evidenceNDBBX284601
Public_nameain-2
DB_infoDatabaseAceViewgene1F227
WormQTLgeneWBGene00015007
WormFluxgeneWBGene00015007
NDBlocus_tagCELE_B0041.2
NCBIgene172076
RefSeqproteinNM_001379884.1
NM_001356820.2
NM_001392189.1
NM_001356823.4
NM_001356822.4
NM_001379889.3
NM_001025786.5
TREEFAMTREEFAM_IDTF350152
TrEMBLUniProtAccA0A2C9C2E8
A0A2C9C358
H2KY59
Q95R18
H2KY58
H2KY60
A0A2C9C2L0
UniProt_GCRPUniProtAccH2KY58
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:55WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
202 Apr 2009 15:36:55WBPerson9133Name_changeCGC_nameain-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classain
Allele (108)
StrainWBStrain00026535
WBStrain00054872
RNASeq_FPKM (74)
GO_annotation00021370
00021371
00021372
00021373
Ortholog (23)
Structured_descriptionConcise_descriptionain-2 encodes, by alternative splicing, three isoforms of anunfamiliar protein paralogous to AIN-1, and homologous to Brugia malayi14748.m00068, 14052.m00191, and 14963.m01790; AIN-2 protein bindsGEI-4 and GEI-16 in yeast two-hybrid experiments; AIN-2 and itsnematode homologs have weak similarity to human TNRC6A (GW182;OMIM:610739) and Drosophila GAWKY; ain-2 has no obvious function inmass RNAi assays.Paper_evidenceWBPaper00006332
WBPaper00026707
Curator_confirmedWBPerson1843
WBPerson567
Date_last_updated15 Jul 2009 00:00:00
Automated_descriptionInvolved in negative regulation of gene expression; regulation of cell fate specification; and regulation of development, heterochronic. Expressed widely.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSB0041.2a
B0041.2b
B0041.2c
B0041.2d
B0041.2e
B0041.2f
B0041.2g
Corresponding_CDS_historyB0041.2b:wp93
B0041.2b:wp261
B0041.2c:wp224
Corresponding_transcriptB0041.2a.1
B0041.2a.2
B0041.2b.1
B0041.2c.1
B0041.2d.1
B0041.2e.1
B0041.2f.1
B0041.2g.1
Other_sequenceCRC03536_1
CRC04330_1
CBC12396_1
CR10521
CR12291
Associated_featureWBsf656239
WBsf656240
WBsf656241
WBsf983457
WBsf983458
WBsf1009690
WBsf1009691
WBsf217558
WBsf217559
WBsf217560
Experimental_infoRNAi_resultWBRNAi00069760Inferred_automaticallyRNAi_primary
WBRNAi00002827Inferred_automaticallyRNAi_primary
WBRNAi00078265Inferred_automaticallyRNAi_primary
WBRNAi00038690Inferred_automaticallyRNAi_primary
WBRNAi00069761Inferred_automaticallyRNAi_primary
WBRNAi00038686Inferred_automaticallyRNAi_primary
Expr_patternExpr7851
Expr10993
Expr13424
Expr1010251
Expr1036414
Expr1142893
Expr2009273
Expr2027510
Drives_constructWBCnstr00004972
WBCnstr00017844
WBCnstr00029164
WBCnstr00039525
Construct_productWBCnstr00004972
WBCnstr00017844
WBCnstr00029164
WBCnstr00039525
Regulate_expr_clusterWBPaper00031252:AIN-2_IP_enriched
WBPaper00035084:embryo_enriched_AIN-2_IP
WBPaper00035084:L1_enriched_AIN-2_IP
WBPaper00035084:L2_enriched_AIN-2_IP
WBPaper00035084:L3_enriched_AIN-2_IP
WBPaper00035084:L4_enriched_AIN-2_IP
WBPaper00040985:AIN-2_asynchronous_intestine
WBPaper00040985:AIN-2_asynchronous_muscle
WBPaper00040985:AIN-2_L4_intestine
WBPaper00042548:miRISC_enriched
AntibodyWBAntibody00002712
Microarray_results (39)
Expression_clusterWBPaper00028451:Oogenic_protein
WBPaper00032425:up_in_zfp-1
WBPaper00032528:L3_enriched
WBPaper00037055:DAF-16_binding_DNA
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00038118:aak-2(gt33)_upregulated
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044426:rotenone_24h_downregulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Gender_Neutral
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00048988:neuron_expressed
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
WBPaper00050015:ifg-1(RNAi)_upregulated
WBPaper00050234:lin-28(RNAi)_upregulated
WBPaper00050412:cco-1(RNAi)_upregulated_N2
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00051039:germline_enriched
WBPaper00051245:body-wall-muscle_cytoplasm_expressed
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051310:LIN-41_interacting
WBPaper00051558:aging_regulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055049:S.gordonii_upregulated
WBPaper00055226:ADR-2_target_N2
WBPaper00055334:DLC-1_interacting
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055565:AVK_enriched
WBPaper00055648:germline_expressed
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00057288:Cold_downregulated_transcript
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059605:MUT-16_interacting
WBPaper00059763:neuron_expressed
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061199:GYF-1_interacting
WBPaper00061478:SUMO-conjugated_protein
WBPaper00061479:HDA-1_interacting_protein
WBPaper00061527:pkn-1_20439-tbc-12_11015
WBPaper00061527:utx-1_2886-swan-1_2192
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064071:NHR-49_interacting
WBPaper00064080:let-7_miRNA_interacting
WBPaper00064080:miR-2_miRNA_interacting
WBPaper00064080:miR-58_miRNA_interacting
WBPaper00064494:postdauer_upregulated_AWA
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00025032:cluster_68
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00031532:Larva_Pan_Neuronal_Enriched
WBPaper00035084:L1_enriched_AIN-2_IP
WBPaper00035905:FBF-1_Associated
WBPaper00036130:mir-243_down_regulated
WBPaper00040821:Au-NP_regulated
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00040963:TA300_down
WBPaper00040985:AIN-2_asynchronous_muscle
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
[cgc5767]:expression_class_E
[cgc5767]:expression_class_ET
[cgc5767]:expression_class_ET_max(53_min)
[cgc5767]:expression_class_E_pi(53_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_ME
[cgc5767]:expression_class_MET
Interaction (50)
Map_infoMapIPosition-1.02852Error0.002242
PositivePositive_cloneB0041Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (19)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene