WormBase Tree Display for Gene: WBGene00013347

WBGene00013347 SMap: S_parent: Sequence: Y59A8B
  Identity: Version: 2
    Name: CGC_name: nova-1 Person_evidence: WBPerson260
      Sequence_name: Y59A8B.10
      Molecular_name (12)
      Other_name: CELE_Y59A8B.10 Accession_evidence: NDB BX284605
      Public_name: nova-1
    DB_info: Database: AceView gene 5S550
        WormQTL gene WBGene00013347
        WormFlux gene WBGene00013347
        NDB locus_tag CELE_Y59A8B.10
        Panther gene CAEEL|WormBase=WBGene00013347|UniProtKB=Q9GRY9
          family PTHR10288
        NCBI gene 180183
        RefSeq protein NM_001269841.3
            NM_001373184.1
            NM_001269842.3
            NM_001269840.2
        TREEFAM TREEFAM_ID TF316981
        TrEMBL UniProtAcc E0R7K8
            A0A4V0ILI5
            E0R7K7
            Q9GRY9
        UniProt_GCRP UniProtAcc A0A4V0ILI5
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 17 Feb 2017 09:43:49 WBPerson2970 Name_change: CGC_name: nova-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nova
    Allele (311)
    Strain: WBStrain00051859
    RNASeq_FPKM (74)
    GO_annotation (13)
    Contained_in_operon: CEOP5497
    Ortholog (43)
    Paralog: WBGene00003978 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00007534 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00010908 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00017816 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00019692 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00016489 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00022738 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00015557 Caenorhabditis elegans From_analysis: Panther
      WBGene00022737 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable mRNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome and regulation of alternative mRNA splicing, via spliceosome. Predicted to be located in cytoplasm and nucleus. Is an ortholog of human NOVA1 (NOVA alternative splicing regulator 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y59A8B.10a
      Y59A8B.10b
      Y59A8B.10c
      Y59A8B.10d
    Corresponding_transcript: Y59A8B.10a.1
      Y59A8B.10b.1
      Y59A8B.10c.1
      Y59A8B.10d.1
    Other_sequence (51)
    Associated_feature: WBsf047636
      WBsf669837
      WBsf1002816
      WBsf1002817
      WBsf1021402
  Experimental_info: RNAi_result: WBRNAi00115202 Inferred_automatically: RNAi_primary
      WBRNAi00057743 Inferred_automatically: RNAi_primary
      WBRNAi00033269 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022156
      Expr1035960
      Expr1161166
      Expr2014359
      Expr2032600
    Microarray_results (16)
    Expression_cluster (128)
    Interaction (52)
  Map_info: Map: V Position: 13.8442
    Positive: Positive_clone: Y59A8B Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00058216
    WBPaper00062568
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene