WormBase Tree Display for Gene: WBGene00015557
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| WBGene00015557 | SMap | S_parent | Sequence | C06G4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | hrpk-2 | Person_evidence | WBPerson260 | |||||
| Sequence_name | C06G4.1 | ||||||||
| Molecular_name | C06G4.1 | ||||||||
| C06G4.1.1 | |||||||||
| CE28203 | |||||||||
| Other_name | CELE_C06G4.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | hrpk-2 | ||||||||
| DB_info | Database | AceView | gene | 3J79 | |||||
| WormQTL | gene | WBGene00015557 | |||||||
| WormFlux | gene | WBGene00015557 | |||||||
| NDB | locus_tag | CELE_C06G4.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015557|UniProtKB=P34307 | |||||||
| family | PTHR10288 | ||||||||
| NCBI | gene | 176123 | |||||||
| RefSeq | protein | NM_066341.5 | |||||||
| SwissProt | UniProtAcc | P34307 | |||||||
| TREEFAM | TREEFAM_ID | TF327133 | |||||||
| UniProt_GCRP | UniProtAcc | P34307 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 21 Nov 2019 11:04:57 | WBPerson1983 | Name_change | CGC_name | hrpk-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hrpk | ||||||||
| Allele (38) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00041513 | ||||||||
| 00041514 | |||||||||
| 00041515 | |||||||||
| 00041516 | |||||||||
| 00041517 | |||||||||
| 00041518 | |||||||||
| 00041519 | |||||||||
| 00121427 | |||||||||
| 00121428 | |||||||||
| Contained_in_operon | CEOP3873 | ||||||||
| Ortholog | WBGene00142166 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||||
| WBGene00132930 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| WBGene00056801 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| CSP28.g11356 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
| CSP28.g3824 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
| CSP29.g16817 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
| CSP39.g10632 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| CSP39.g1119 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| CSP39.g15666 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| chrIII_pilon.g8281 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00003978 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00007534 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00010908 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00013347 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00017816 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00016489 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00022738 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00019692 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00022737 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to enable mRNA 3'-UTR binding activity. Predicted to be involved in nervous system development and regulation of gene expression. Predicted to be located in cytosol and nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C06G4.1 | |||||||
| Corresponding_transcript | C06G4.1.1 | ||||||||
| Associated_feature | WBsf654978 | ||||||||
| WBsf225325 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00039942 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00062110 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028598 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001892 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023881 | ||||||||
| Expr1036664 | |||||||||
| Expr1144016 | |||||||||
| Expr2000546 | |||||||||
| Expr2018772 | |||||||||
| Drives_construct | WBCnstr00028753 | ||||||||
| Construct_product | WBCnstr00028753 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (106) | |||||||||
| Interaction | WBInteraction000543040 | ||||||||
| WBInteraction000549685 | |||||||||
| WBInteraction000570059 | |||||||||
| WBInteraction000573811 | |||||||||
| WBInteraction000579160 | |||||||||
| WBInteraction000579181 | |||||||||
| Map_info | Map | III | Position | -0.451275 | |||||
| Positive | Positive_clone | C06G4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
