WormBase Tree Display for Gene: WBGene00012591
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WBGene00012591 | SMap | S_parent | Sequence | Y38E10A | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | nspe | |||||
Allele | WBVar00776658 | |||||
WBVar01499702 | ||||||
WBVar01498435 | ||||||
WBVar00311724 | ||||||
WBVar01499956 | ||||||
WBVar01766809 | ||||||
WBVar01248289 | ||||||
WBVar01248290 | ||||||
WBVar01248291 | ||||||
WBVar01500009 | ||||||
WBVar01500010 | ||||||
WBVar01498941 | ||||||
WBVar01499326 | ||||||
WBVar01499327 | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (62) | ||||||
Paralog | WBGene00012587 | Caenorhabditis elegans | From_analysis | TreeFam | ||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00012589 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | ||||||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00012590 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | ||||||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00012594 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00012593 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00175028 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00012604 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | ||||||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00012603 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in AINL; AINR; PLM; and hypodermis based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirty-five chemicals including methylmercury hydroxide; 1-methylnicotinamide; and rotenone based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF1412) and Protein of unknown function DUF1412. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Y38E10A.13 | ||||
Corresponding_transcript | Y38E10A.13.1 | |||||
Associated_feature | WBsf650663 | |||||
WBsf224086 | ||||||
Experimental_info | RNAi_result | WBRNAi00036839 | Inferred_automatically | RNAi_primary | ||
WBRNAi00020283 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1159531 | |||||
Expr2014487 | ||||||
Expr2032726 | ||||||
Drives_construct | WBCnstr00029895 | |||||
Construct_product | WBCnstr00029895 | |||||
Microarray_results (14) | ||||||
Expression_cluster (240) | ||||||
Interaction | WBInteraction000549461 | |||||
WBInteraction000549462 | ||||||
Map_info | Map | II | Position | 10.5075 | ||
Positive | Positive_clone | Y38E10A | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |