WormBase Tree Display for Gene: WBGene00012604

WBGene00012604 SMap: S_parent: Sequence: Y38E10A
  Identity: Version: 2
    Name: CGC_name: nspe-2 Person_evidence: WBPerson1983
      Sequence_name: Y38E10A.26
      Molecular_name: Y38E10A.26
        Y38E10A.26.1
        CE35075
      Other_name: CELE_Y38E10A.26 Accession_evidence: NDB BX284602
      Public_name: nspe-2
    DB_info: Database: AceView gene 2M908
        WormQTL gene WBGene00012604
        WormFlux gene WBGene00012604
        NDB locus_tag CELE_Y38E10A.26
        Panther gene CAEEL|WormBase=WBGene00012604|UniProtKB=Q7YWR0
          family PTHR34602
        NCBI gene 3565123
        RefSeq protein NM_001027255.3
        TREEFAM TREEFAM_ID TF319947
        TrEMBL UniProtAcc Q7YWR0
        UniProt_GCRP UniProtAcc Q7YWR0
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 19 Nov 2008 14:26:07 WBPerson2970 Name_change: CGC_name: nspe-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nspe
    Allele (12)
    RNASeq_FPKM (74)
    Ortholog (63)
    Paralog: WBGene00012587 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00012589 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00012590 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00012591 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00012593 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00012594 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00012603 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00175028 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including MSaapapa; MSpapapa; arcade cell; germline precursor cell; and pharyngeal-intestinal valve cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and age-1 based on microarray and RNA-seq studies. Is affected by thirty-two chemicals including hydrogen sulfide; methylmercury hydroxide; and 1-methylnicotinamide based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF1412) and Protein of unknown function DUF1412. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y38E10A.26
    Corresponding_transcript: Y38E10A.26.1
    Associated_feature: WBsf650662
      WBsf224085
  Experimental_info: Expr_pattern: Expr1022879
      Expr1159544
      Expr2014488
      Expr2032727
    Drives_construct: WBCnstr00029887
    Construct_product: WBCnstr00029887
    Microarray_results: 186726_at
      A_12_P117900
      GPL14144_Y38E10A.26_63-122_0.669_4_A
      GPL19516_CGZ0044582
      GPL21109_Y38E10A.26
      GPL8304_CE_WBGene00012604_A
      GPL8673_Y38E10A_26P00065
      GPL8673_Y38E10A_26P00069
      GPL8673_Y38E10A_26P00117
    Expression_cluster (208)
  Map_info: Map: II Position: 10.5038
    Positive: Positive_clone: Y38E10A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene