WormBase Tree Display for Gene: WBGene00012589

WBGene00012589 SMap: S_parent: Sequence: Y38E10A
  Identity: Version: 2
    Name: CGC_name: nspe-4 Person_evidence: WBPerson1983
      Sequence_name: Y38E10A.11
      Molecular_name: Y38E10A.11
        Y38E10A.11.1
        CE21591
      Other_name: CELE_Y38E10A.11 Accession_evidence: NDB BX284602
      Public_name: nspe-4
    DB_info: Database: AceView gene 2M905
        WormQTL gene WBGene00012589
        WormFlux gene WBGene00012589
        NDB locus_tag CELE_Y38E10A.11
        Panther gene CAEEL|WormBase=WBGene00012589|UniProtKB=Q9NAK0
          family PTHR34602
        NCBI gene 189658
        RefSeq protein NM_064293.2
        TREEFAM TREEFAM_ID TF319947
        TrEMBL UniProtAcc Q9NAK0
        UniProt_GCRP UniProtAcc Q9NAK0
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 19 Nov 2008 14:26:07 WBPerson2970 Name_change: CGC_name: nspe-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nspe
    Allele (81)
    RNASeq_FPKM (74)
    Ortholog (62)
    Paralog: WBGene00012587 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00012594 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00012604 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00012591 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00012590 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00012603 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00012593 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00175028 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Enriched in ADEshL; ADEshR; germline precursor cell; and neurons based on tiling array; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty chemicals including hydrogen sulfide; rotenone; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF1412) and Protein of unknown function DUF1412. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y38E10A.11
    Corresponding_transcript: Y38E10A.11.1
    Associated_feature: WBsf657182
      WBsf222278
  Experimental_info: RNAi_result: WBRNAi00020281 Inferred_automatically: RNAi_primary
      WBRNAi00036838 Inferred_automatically: RNAi_primary
      WBRNAi00056011 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013397
      Expr1159529
      Expr2014490
      Expr2032729
    Drives_construct: WBCnstr00029897
    Construct_product: WBCnstr00029897
    Microarray_results (19)
    Expression_cluster (106)
  Map_info: Map: II Position: 10.4894 Error: 0.00888
    Positive: Positive_clone: Y38E10A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene