WormBase Tree Display for Gene: WBGene00012591
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WBGene00012591 | SMap | S_parent | Sequence | Y38E10A | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | nspe-1 | Person_evidence | WBPerson1983 | |||
Sequence_name | Y38E10A.13 | ||||||
Molecular_name | Y38E10A.13 | ||||||
Y38E10A.13.1 | |||||||
CE21593 | |||||||
Other_name | CELE_Y38E10A.13 | Accession_evidence | NDB | BX284602 | |||
Public_name | nspe-1 | ||||||
DB_info | Database | AceView | gene | 2M910 | |||
WormQTL | gene | WBGene00012591 | |||||
WormFlux | gene | WBGene00012591 | |||||
NDB | locus_tag | CELE_Y38E10A.13 | |||||
Panther | gene | CAEEL|WormBase=WBGene00012591|UniProtKB=Q9NAJ8 | |||||
family | PTHR34602 | ||||||
NCBI | gene | 189660 | |||||
RefSeq | protein | NM_064295.6 | |||||
TREEFAM | TREEFAM_ID | TF319947 | |||||
TrEMBL | UniProtAcc | Q9NAJ8 | |||||
UniProt_GCRP | UniProtAcc | Q9NAJ8 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nspe | ||||||
Allele (14) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (62) | |||||||
Paralog | WBGene00012587 | Caenorhabditis elegans | From_analysis (3) | ||||
WBGene00012589 | Caenorhabditis elegans | From_analysis (4) | |||||
WBGene00012590 | Caenorhabditis elegans | From_analysis (4) | |||||
WBGene00012594 | Caenorhabditis elegans | From_analysis (3) | |||||
WBGene00012593 | Caenorhabditis elegans | From_analysis (3) | |||||
WBGene00175028 | Caenorhabditis elegans | From_analysis (2) | |||||
WBGene00012604 | Caenorhabditis elegans | From_analysis (4) | |||||
WBGene00012603 | Caenorhabditis elegans | From_analysis (3) | |||||
Structured_description | Automated_description | Enriched in AINL; AINR; PLM; and hypodermis based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirty-five chemicals including methylmercury hydroxide; 1-methylnicotinamide; and rotenone based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF1412) and Protein of unknown function DUF1412. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y38E10A.13 | |||||
Corresponding_transcript | Y38E10A.13.1 | ||||||
Associated_feature | WBsf650663 | ||||||
WBsf224086 | |||||||
Experimental_info | RNAi_result | WBRNAi00036839 | Inferred_automatically | RNAi_primary | |||
WBRNAi00020283 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1159531 | ||||||
Expr2014487 | |||||||
Expr2032726 | |||||||
Drives_construct | WBCnstr00029895 | ||||||
Construct_product | WBCnstr00029895 | ||||||
Microarray_results (14) | |||||||
Expression_cluster (240) | |||||||
Interaction | WBInteraction000549461 | ||||||
WBInteraction000549462 | |||||||
Map_info | Map | II | Position | 10.5075 | |||
Positive | Positive_clone | Y38E10A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |