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WormBase Tree Display for Gene: WBGene00012591

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Name Class

WBGene00012591SMapS_parentSequenceY38E10A
IdentityVersion2
NameCGC_namenspe-1Person_evidenceWBPerson1983
Sequence_nameY38E10A.13
Molecular_nameY38E10A.13
Y38E10A.13.1
CE21593
Other_nameCELE_Y38E10A.13Accession_evidenceNDBBX284602
Public_namenspe-1
DB_infoDatabaseAceViewgene2M910
WormQTLgeneWBGene00012591
WormFluxgeneWBGene00012591
NDBlocus_tagCELE_Y38E10A.13
PanthergeneCAEEL|WormBase=WBGene00012591|UniProtKB=Q9NAJ8
familyPTHR34602
NCBIgene189660
RefSeqproteinNM_064295.6
TREEFAMTREEFAM_IDTF319947
TrEMBLUniProtAccQ9NAJ8
UniProt_GCRPUniProtAccQ9NAJ8
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:54WBPerson1971EventImportedInitial conversion from CDS class of WS125
219 Nov 2008 14:26:07WBPerson2970Name_changeCGC_namenspe-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnspe
Allele (14)
RNASeq_FPKM (74)
OrthologWBGene00072588Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00031730Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00031731Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00031732Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00042852Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00059616Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00059617Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00072587Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00159672Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00144387Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00192892Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00209558Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00216867Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00129049Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00206858Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00212572Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00213280Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00210734Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00209053Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00126459Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00207680Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00212684Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00207833Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00216609Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00059613Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00059614Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00031729Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CBOVI.g6317Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g6318Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP28.g15917Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g15918Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g15919Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g20355Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g16950Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g16951Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16040Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g16043Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g16044Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g16045Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g10091Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
Cnig_chr_II.g7586Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7587Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7588Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7589Caenorhabditis nigoniFrom_analysisWormBase-Compara
FL83_16905Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_16906Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_16907Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_16908Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_16910Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_16912Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_007153Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_007154Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_007156Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_007157Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_007158Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_007159Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_20031500Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_20031600Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_20031700Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_20031800Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_20031900Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g6225Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00012587Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012589Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00012590Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00012594Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012593Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00175028Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012604Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00012603Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in AINL; AINR; PLM; and hypodermis based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirty-five chemicals including methylmercury hydroxide; 1-methylnicotinamide; and rotenone based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF1412) and Protein of unknown function DUF1412.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY38E10A.13
Corresponding_transcriptY38E10A.13.1
Associated_featureWBsf650663
WBsf224086
Experimental_infoRNAi_resultWBRNAi00036839Inferred_automaticallyRNAi_primary
WBRNAi00020283Inferred_automaticallyRNAi_primary
Expr_patternExpr1159531
Expr2014487
Expr2032726
Drives_constructWBCnstr00029895
Construct_productWBCnstr00029895
Microarray_results (14)
Expression_cluster (240)
InteractionWBInteraction000549461
WBInteraction000549462
Map_infoMapIIPosition10.5075
PositivePositive_cloneY38E10AInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene