WormBase Tree Display for Gene: WBGene00012356
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| WBGene00012356 | SMap | S_parent | Sequence | W09D6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | W09D6.1 | |||||||
| Molecular_name | W09D6.1a | ||||||||
| W09D6.1a.1 | |||||||||
| CE31855 | |||||||||
| W09D6.1b | |||||||||
| CE31856 | |||||||||
| W09D6.1c | |||||||||
| CE43290 | |||||||||
| W09D6.1a.2 | |||||||||
| W09D6.1b.1 | |||||||||
| W09D6.1c.1 | |||||||||
| Other_name | CELE_W09D6.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | W09D6.1 | ||||||||
| DB_info | Database | AceView | gene | 3M161 | |||||
| WormQTL | gene | WBGene00012356 | |||||||
| WormFlux | gene | WBGene00012356 | |||||||
| NDB | locus_tag | CELE_W09D6.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012356|UniProtKB=B6VQ94 | |||||||
| family | PTHR44394 | ||||||||
| NCBI | gene | 176537 | |||||||
| RefSeq | protein | NM_181907.4 | |||||||
| NM_001268177.2 | |||||||||
| NM_001382995.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF354264 | |||||||
| TrEMBL | UniProtAcc | B6VQ94 | |||||||
| Q9XUJ4 | |||||||||
| Q8I104 | |||||||||
| UniProt_GCRP | UniProtAcc | B6VQ94 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (59) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00006373 | ||||||||
| Contained_in_operon | CEOP3716 | ||||||||
| Ortholog (46) | |||||||||
| Paralog | WBGene00016849 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00006351 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00007969 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00009221 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00013440 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00018269 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00018488 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00018579 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to be involved in amino acid activation for nonribosomal peptide biosynthetic process. Is an ortholog of human AASDH (aminoadipate-semialdehyde dehydrogenase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W09D6.1a | |||||||
| W09D6.1b | |||||||||
| W09D6.1c | |||||||||
| Corresponding_CDS_history | W09D6.1:wp85 | ||||||||
| Corresponding_transcript | W09D6.1a.1 | ||||||||
| W09D6.1a.2 | |||||||||
| W09D6.1b.1 | |||||||||
| W09D6.1c.1 | |||||||||
| Associated_feature | WBsf659566 | ||||||||
| WBsf994256 | |||||||||
| WBsf994257 | |||||||||
| WBsf994258 | |||||||||
| WBsf1015920 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00062406 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00006229 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00055042 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019750 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036405 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022382 | ||||||||
| Expr1035472 | |||||||||
| Expr1158582 | |||||||||
| Expr2006888 | |||||||||
| Expr2025115 | |||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (99) | |||||||||
| SAGE_tag | SAGE:ttattgatccgaaaacg | Strand | Sense | ||||||
| Unambiguously_mapped | |||||||||
| SAGE:atgacttcaaaaagcgg | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:atgacttcaa | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:gcttttcacgtgggatg | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:aaaagttcaa | Strand | Antisense | |||||||
| Interaction | WBInteraction000195233 | ||||||||
| WBInteraction000205833 | |||||||||
| WBInteraction000228125 | |||||||||
| WBInteraction000283718 | |||||||||
| WBInteraction000355156 | |||||||||
| WBInteraction000386796 | |||||||||
| WBInteraction000386962 | |||||||||
| WBInteraction000463578 | |||||||||
| Map_info | Positive | Positive_clone | W09D6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 5.88963 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
