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WormBase Tree Display for Gene: WBGene00012356

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Name Class

WBGene00012356SMapS_parentSequenceW09D6
IdentityVersion1
NameSequence_nameW09D6.1
Molecular_nameW09D6.1a
W09D6.1a.1
CE31855
W09D6.1b
CE31856
W09D6.1c
CE43290
W09D6.1a.2
W09D6.1b.1
W09D6.1c.1
Other_nameCELE_W09D6.1Accession_evidenceNDBBX284603
Public_nameW09D6.1
DB_infoDatabaseAceViewgene3M161
WormQTLgeneWBGene00012356
WormFluxgeneWBGene00012356
NDBlocus_tagCELE_W09D6.1
PanthergeneCAEEL|WormBase=WBGene00012356|UniProtKB=B6VQ94
familyPTHR44394
NCBIgene176537
RefSeqproteinNM_181907.4
NM_001268177.2
NM_001382995.1
TREEFAMTREEFAM_IDTF354264
TrEMBLUniProtAccB6VQ94
Q9XUJ4
Q8I104
UniProt_GCRPUniProtAccB6VQ94
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:53WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (59)
RNASeq_FPKM (74)
GO_annotation00006373
Contained_in_operonCEOP3716
OrthologWBGene00033971Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00033972Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00151198Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00078754Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00132268Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00222275Brugia malayiFrom_analysisWormBase-Compara
WBGene00232874Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g5862Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g6236Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g8928Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g5301Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16809Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g21013Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g3464Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g2666Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g10682Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g16412Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g7Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_03267.g17941Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_04078.g18589Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_04143.g18633Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_04875.g19181Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_05228.g19449Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_05765.g19821Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_05853.g19887Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_06420.g20256Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_06678.g20410Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_12659.g23870Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-W09D6.1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold596.g5295Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00150.g5704Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18196Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010321Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g09507Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g17932Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g4491Panagrellus redivivusFrom_analysisWormBase-Compara
chrIII_pilon.g8987Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00243838Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246225Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00114305Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00262970Strongyloides rattiFrom_analysisWormBase-Compara
FB:FBgn0027780Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-041210-322Danio rerioFrom_analysisHieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:23993Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:2442517Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1311135Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ParalogWBGene00016849Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00006351Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00007969Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009221Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013440Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018269Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018488Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018579Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in amino acid activation for nonribosomal peptide biosynthetic process. Is an ortholog of human AASDH (aminoadipate-semialdehyde dehydrogenase).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSW09D6.1a
W09D6.1b
W09D6.1c
Corresponding_CDS_historyW09D6.1:wp85
Corresponding_transcriptW09D6.1a.1
W09D6.1a.2
W09D6.1b.1
W09D6.1c.1
Associated_featureWBsf659566
WBsf994256
WBsf994257
WBsf994258
WBsf1015920
Experimental_infoRNAi_resultWBRNAi00062406Inferred_automaticallyRNAi_primary
WBRNAi00006229Inferred_automaticallyRNAi_primary
WBRNAi00055042Inferred_automaticallyRNAi_primary
WBRNAi00019750Inferred_automaticallyRNAi_primary
WBRNAi00036405Inferred_automaticallyRNAi_primary
Expr_patternExpr1022382
Expr1035472
Expr1158582
Expr2006888
Expr2025115
Microarray_results (27)
Expression_cluster (99)
SAGE_tagSAGE:ttattgatccgaaaacgStrandSense
Unambiguously_mapped
SAGE:atgacttcaaaaagcggStrandSense
Unambiguously_mapped
SAGE:atgacttcaaStrandSense
Unambiguously_mapped
SAGE:gcttttcacgtgggatgStrandSense
Unambiguously_mapped
SAGE:aaaagttcaaStrandAntisense
InteractionWBInteraction000195233
WBInteraction000205833
WBInteraction000228125
WBInteraction000283718
WBInteraction000355156
WBInteraction000386796
WBInteraction000386962
WBInteraction000463578
Map_infoPositivePositive_cloneW09D6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII5.88963
ReferenceWBPaper00038491
WBPaper00055090
MethodGene