WormBase Tree Display for Gene: WBGene00018269
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| WBGene00018269 | SMap | S_parent | Sequence | F41C3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | acs-11 | Person_evidence | WBPerson3206 | |||||
| WBPerson3205 | |||||||||
| Sequence_name | F41C3.3 | ||||||||
| Molecular_name | F41C3.3 | ||||||||
| F41C3.3.1 | |||||||||
| CE32658 | |||||||||
| Other_name | CELE_F41C3.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | acs-11 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 Jul 2005 13:34:00 | WBPerson2970 | Name_change | CGC_name | acs-11 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | acs | ||||||||
| Allele (46) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00067652 | ||||||||
| 00067653 | |||||||||
| 00105663 | |||||||||
| Contained_in_operon | CEOP2703 | ||||||||
| Ortholog (45) | |||||||||
| Paralog | WBGene00009221 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00016849 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00018488 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018579 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00006351 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00007969 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00012356 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00013440 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable medium-chain fatty acid-CoA ligase activity. Involved in IRE1-mediated unfolded protein response. Expressed in hypodermis and intestine. Human ortholog(s) of this gene implicated in combined malonic and methylmalonic acidemia. Is an ortholog of human ACSF3 (acyl-CoA synthetase family member 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111263 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:27288) | ||||
| Molecular_info | Corresponding_CDS | F41C3.3 | |||||||
| Corresponding_CDS_history | F41C3.3:wp86 | ||||||||
| F41C3.3:wp88 | |||||||||
| Corresponding_transcript | F41C3.3.1 | ||||||||
| Other_sequence (27) | |||||||||
| Associated_feature | WBsf978972 | ||||||||
| WBsf987686 | |||||||||
| WBsf987687 | |||||||||
| WBsf221170 | |||||||||
| WBsf221171 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00102586 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014728 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103351 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046957 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2044 | ||||||||
| Expr1014172 | |||||||||
| Expr1037868 | |||||||||
| Expr1150821 | |||||||||
| Expr2009200 | |||||||||
| Expr2027438 | |||||||||
| Drives_construct | WBCnstr00026652 | ||||||||
| Construct_product | WBCnstr00026652 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (152) | |||||||||
| Interaction (159) | |||||||||
| Map_info | Map | II | Position | -3.0897 | Error | 0.007002 | |||
| Positive | Positive_clone | F41C3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026800 | ||||||||
| WBPaper00027365 | |||||||||
| WBPaper00028527 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061746 | |||||||||
| WBPaper00064255 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
