WormBase Tree Display for Gene: WBGene00016849
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| WBGene00016849 | SMap | S_parent | Sequence | C50H11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | acs-21 | Person_evidence | WBPerson237 | |||||
| WBPerson2239 | |||||||||
| Sequence_name | C50H11.1 | ||||||||
| Molecular_name | C50H11.1 | ||||||||
| C50H11.1.1 | |||||||||
| CE08917 | |||||||||
| Other_name | CELE_C50H11.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | acs-21 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 11 Sep 2008 09:57:25 | WBPerson2970 | Name_change | CGC_name | acs-21 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | acs | ||||||||
| Allele (140) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00028150 | ||||||||
| 00028151 | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00009221 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00012356 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00018269 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00018579 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018488 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00006351 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00007969 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00013440 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable medium-chain fatty acid-CoA ligase activity. Predicted to be involved in fatty acid metabolic process. Human ortholog(s) of this gene implicated in combined malonic and methylmalonic acidemia. Is an ortholog of human ACSF3 (acyl-CoA synthetase family member 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111263 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:27288) | ||||
| Molecular_info | Corresponding_CDS | C50H11.1 | |||||||
| Corresponding_transcript | C50H11.1.1 | ||||||||
| Other_sequence | Tcol_isotig16126 | ||||||||
| FC817579.1 | |||||||||
| Oden_isotig23555 | |||||||||
| SR02202 | |||||||||
| FC811977.1 | |||||||||
| SRC02513_1 | |||||||||
| Associated_feature | WBsf231547 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00012247 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042960 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030057 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013820 | ||||||||
| Expr1037231 | |||||||||
| Expr1146927 | |||||||||
| Expr2009211 | |||||||||
| Expr2027448 | |||||||||
| Drives_construct | WBCnstr00027755 | ||||||||
| Construct_product | WBCnstr00027755 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (120) | |||||||||
| Interaction (33) | |||||||||
| Map_info | Map | V | Position | -12.757 | Error | 0.003186 | |||
| Positive | Positive_clone | C50H11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
