Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00007659

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00007659SMapS_parentSequenceC17H1
Identity (6)
Gene_infoBiotypeSO:0001217
Gene_classpals
Allele (29)
RNASeq_FPKM (74)
GO_annotation00034109
00034110
00034111
OrthologWBGene00271585Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CSP26.g4056Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP40.g862Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_V.g18706Caenorhabditis nigoniFrom_analysisWormBase-Compara
GCK72_018441Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrI_pilon.g2657Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00007657Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00007660Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00012505Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00007131Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00007132Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00007134Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionInvolved in innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC17H1.6
Corresponding_transcriptC17H1.6.1
Associated_featureWBsf220478
Experimental_infoRNAi_resultWBRNAi00040849Inferred_automaticallyRNAi_primary
WBRNAi00002983Inferred_automaticallyRNAi_primary
Expr_patternExpr1144896
Expr2014711
Expr2032946
Drives_constructWBCnstr00019406
WBCnstr00033573
Construct_productWBCnstr00033573
AntibodyWBAntibody00003021
Microarray_results (13)
Expression_clusterWBPaper00032425:up_in_lin-35
WBPaper00032528:L3_depleted
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_adult_enriched
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038168:lin-15B(n744)_upregulated
WBPaper00038168:lin-35_upregulated
WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00042194:nhr-114(RNAi)_downregulated
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00042561:smgl-2(RNAi)_upregulated
WBPaper00044316:HgCl2_20uM_upregulated
WBPaper00044743:wdr-23_neuron_upregulated
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045401:N.parisii_8h_upregulated
WBPaper00045401:N.parisii_16h_upregulated
WBPaper00045401:N.parisii_30h_upregulated
WBPaper00045401:N.parisii_40h_upregulated
WBPaper00045401:N.parisii_64h_upregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045774:clk-1_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00049018:ham-3(RNAi)_downregulated
WBPaper00049484:elt-2(RNAi)_upregulated_L4
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050193:lsm-1(tm3585)_upregulated_L3
WBPaper00050193:met-2(n4256)set-25(n5021)_upregulated_L1
WBPaper00050468:hlh-30-dependent_Cry5B_regulated
WBPaper00050504:hrp-2(RNAi)_upregulated
WBPaper00051137:N.parisii-virus_upregulated_N2
WBPaper00051137:Orsay-virus_upregulated_N2
WBPaper00051137:Orsay-virus_upregulated_rde-1(ne219)
WBPaper00051371:Orsay-virus-infection_upregulated_rde-1(ne219)
WBPaper00051558:aging_regulated
WBPaper00053020:OrsayVirus-infection_upregulated
WBPaper00053020:OrsayVirus-infection_upregulated_microarray
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_doenregulated
WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
WBPaper00054493:hpl-2(tm1489)_downregulated
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055013:spt-16(RNAi)_upregulated
WBPaper00055226:adr-1(tm668)_upregulated
WBPaper00055354:Metformin_upregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056034:pals-25(jy9)_upregulated
WBPaper00056167:ifo-1(kc2)_downregulated
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058711:paraquat_downregulated
WBPaper00058711:skn-1(lax188)_upregulated
WBPaper00058711:wdr-5(ok1417)_downregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00059426:SiO2-nanoparticles_downregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060434:pH4.33_vs_pH6.33_uprgulated
WBPaper00060445:nfki-1(cer1)_downregulated_L4
WBPaper00060871:M.humicola-extract_4h_regulated
WBPaper00060871:M.humicola-infection_48h_regulated
WBPaper00060886:met-2(n4256)_upregulated
WBPaper00060886:spr-5(by101);met-2(n4256)_upregulated
WBPaper00061319:pnp-1(jy90)_upregulated
WBPaper00061319:pnp-1(jy121)_upregulated
WBPaper00061340:ABarpaaa_lineage
WBPaper00061341:28C_48h_upregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061527:C17H1.6-C17H1.13
WBPaper00061530:nhr-49(e2144)_upregulated
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00062056:dpl-1(n2994)_upregulated
WBPaper00062056:lin-15B(n744)_upregulated
WBPaper00062056:lin-15B(we23)_upregulated
WBPaper00062056:lin-35(n745)_upregulated
WBPaper00062056:lin-37(n758)_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062345:bortezomib_4h_upregulated_N2
WBPaper00062345:bortezomib_4h_upregulated_zip-1(jy13)
WBPaper00062345:bortezomib_30min_upregulated_N2
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062354:H.zoospora_12h_regulated
WBPaper00063926:chd-7(gk290)_upregulated
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064107:lin-35(n745)_upregulated
WBPaper00064532:pals-22(jy3)_upregulated
WBPaper00064532:pals-25(icb98)_upregulated
WBPaper00064532:pals-25(jy111)_upregulated
WBPaper00064661:lpd-3(ok2138)_upregulated
WBPaper00065086:JU1400_N.ausubeli_regulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065086:JU1400_N.ironsii_regulated
WBPaper00065086:JU1400_N.parisii_regulated
WBPaper00065086:N2_N.ausubeli_regulated
WBPaper00065086:N2_N.ferruginous_regulated
WBPaper00065086:N2_N.ironsii_regulated
WBPaper00065086:N2_N.parisii_regulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_20C
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_25C
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00065995:M.humicola-extract_downregulated_N2
WBPaper00066204:CdCl2_upregulated_mRNA
WBPaper00066232:ash-2(RNAi)_downregulated_WT
WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
WBPaper00066232:hsf-1(RNAi)_upregulated_WT
cgc4489_group_9
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00032062:age_regulated_genes
WBPaper00032165:differentially_expressed_with_age_medoid_2
WBPaper00035227:heat_shock_regulated
WBPaper00036286:Pattern_H
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00041267:SpaceFlight_Upregulated
WBPaper00041609:hpl-1_hpl-2_upregulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00042574:N2_OrsayVirus_upregulated
WBPaper00042574:rde-1(ne219)_OrsayVirus_upregulated
WBPaper00044535:male_upregulated
WBPaper00045401:N.parisii_34h_upregulated_N2
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
Interaction (191)
Map_infoMapIPosition17.2222
PositivePositive_cloneC17H1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (13)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene