WormBase Tree Display for Gene: WBGene00006053

WBGene00006053 SMap: S_parent: Sequence: T28H11
  Identity: Version: 1
    Name: CGC_name: ssq-4 Person_evidence: WBPerson680
      Sequence_name: T28H11.1
      Molecular_name: T28H11.1
        T28H11.1.1
        CE30698
      Other_name: CELE_T28H11.1 Accession_evidence: NDB BX284604
      Public_name: ssq-4
    DB_info: Database: AceView gene 4F781
        WormQTL gene WBGene00006053
        WormFlux gene WBGene00006053
        NDB locus_tag CELE_T28H11.1
        Panther gene CAEEL|WormBase=WBGene00006053|UniProtKB=Q23062
          family PTHR31192
        NCBI gene 177269
        RefSeq protein NM_068303.5
        TrEMBL UniProtAcc Q23062
        UniProt_GCRP UniProtAcc Q23062
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:39 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ssq
    Allele (40)
    RNASeq_FPKM (74)
    Ortholog (31)
    Paralog: WBGene00006050 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00006051 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00006052 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Enriched in amphid sheath cell and sperm based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and age-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty-eight chemicals including Ethanol; methylmercury hydroxide; and nicotinic acid based on RNA-seq; microarray; and proteomic studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T28H11.1
    Corresponding_transcript: T28H11.1.1
    Other_sequence (214)
    Associated_feature: WBsf228249
  Experimental_info: RNAi_result: WBRNAi00022580 Inferred_automatically: RNAi_primary
      WBRNAi00021725 Inferred_automatically: RNAi_primary
      WBRNAi00036108 Inferred_automatically: RNAi_primary
      WBRNAi00058954 Inferred_automatically: RNAi_primary
      WBRNAi00021719 Inferred_automatically: RNAi_primary
      WBRNAi00007446 Inferred_automatically: RNAi_primary
      WBRNAi00019418 Inferred_automatically: RNAi_primary
      WBRNAi00054449 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014267
      Expr1157994
      Expr2016943
      Expr2035091
    Drives_construct: WBCnstr00014273
      WBCnstr00034571
    Construct_product: WBCnstr00034571
    Microarray_results (19)
    Expression_cluster (252)
    Interaction (186)
  Map_info: Map: IV Position: 1.41724 Error: 0.000928
    Positive: Positive_clone: T28H11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00025088
    WBPaper00038491
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene