WormBase Tree Display for Gene: WBGene00006051

WBGene00006051 SMap: S_parent: Sequence: T28H11
  Identity: Version: 1
    Name: CGC_name: ssq-2 Person_evidence: WBPerson680
      Sequence_name: T28H11.5
      Molecular_name: T28H11.5
        T28H11.5.1
        CE14377
      Other_name: CELE_T28H11.5 Accession_evidence: NDB BX284604
      Public_name: ssq-2
    DB_info: Database: AceView gene 4F761
        WormQTL gene WBGene00006051
        WormFlux gene WBGene00006051
        NDB locus_tag CELE_T28H11.5
        Panther gene CAEEL|WormBase=WBGene00006051|UniProtKB=Q23057
          family PTHR31192
        NCBI gene 177265
        RefSeq protein NM_068297.4
        TrEMBL UniProtAcc Q23057
        UniProt_GCRP UniProtAcc Q23057
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:39 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ssq
    Allele (37)
    RNASeq_FPKM (74)
    Ortholog (36)
    Paralog: WBGene00006050 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00006052 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00006053 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including ALN; BDU; distal tip cell; sperm; and touch receptor neurons based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and age-1 based on microarray and RNA-seq studies. Is affected by twenty-eight chemicals including Ethanol; methylmercury hydroxide; and 1-methylnicotinamide based on RNA-seq; microarray; and proteomic studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T28H11.5
    Corresponding_transcript: T28H11.5.1
    Other_sequence: CSC01616_1
      CBC00721_1
      Tcol_isotig10177
      CJC16568_1
      Hbac_isotig07275
      CRC01276_1
      FD517634.1
    Associated_feature: WBsf228247
  Experimental_info: RNAi_result: WBRNAi00026430 Inferred_automatically: RNAi_primary
      WBRNAi00022622 Inferred_automatically: RNAi_primary
      WBRNAi00026431 Inferred_automatically: RNAi_primary
      WBRNAi00022671 Inferred_automatically: RNAi_primary
      WBRNAi00027489 Inferred_automatically: RNAi_primary
      WBRNAi00054453 Inferred_automatically: RNAi_primary
      WBRNAi00019422 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1025706
      Expr1032534
      Expr1157998
      Expr2016941
      Expr2035089
    Drives_construct: WBCnstr00034573
    Construct_product: WBCnstr00034573
    Microarray_results (18)
    Expression_cluster (251)
    Interaction (196)
  Map_info: Map: IV Position: 1.40193 Error: 0.000786
    Positive: Positive_clone: T28H11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00025088
    WBPaper00038491
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene