WormBase Tree Display for Gene: WBGene00006053
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WBGene00006053 | SMap | S_parent | Sequence | T28H11 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ssq | ||||||
Allele (40) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (31) | |||||||
Paralog | WBGene00006050 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00006051 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00006052 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||
Panther | |||||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Enriched in amphid sheath cell and sperm based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and age-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty-eight chemicals including Ethanol; methylmercury hydroxide; and nicotinic acid based on RNA-seq; microarray; and proteomic studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T28H11.1 | |||||
Corresponding_transcript | T28H11.1.1 | ||||||
Other_sequence (214) | |||||||
Associated_feature | WBsf228249 | ||||||
Experimental_info | RNAi_result | WBRNAi00022580 | Inferred_automatically | RNAi_primary | |||
WBRNAi00021725 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00036108 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00058954 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00021719 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00007446 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00019418 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00054449 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1014267 | ||||||
Expr1157994 | |||||||
Expr2016943 | |||||||
Expr2035091 | |||||||
Drives_construct | WBCnstr00014273 | ||||||
WBCnstr00034571 | |||||||
Construct_product | WBCnstr00034571 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (252) | |||||||
Interaction (186) | |||||||
Map_info | Map | IV | Position | 1.41724 | Error | 0.000928 | |
Positive | Positive_clone | T28H11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00025088 | ||||||
WBPaper00038491 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |