WormBase Tree Display for Gene: WBGene00005010
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| WBGene00005010 | Evidence | Paper_evidence | WBPaper00005525 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y40B1B | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | spr-5 | Person_evidence | WBPerson220 | |||||
| Sequence_name | Y40B1B.6 | ||||||||
| Molecular_name | Y40B1B.6 | ||||||||
| Y40B1B.6.1 | |||||||||
| CE20240 | |||||||||
| Y40B1B.6.2 | |||||||||
| Other_name | CELE_Y40B1B.6 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | spr-5 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | spr | ||||||||
| Allele (202) | |||||||||
| Strain | WBStrain00003899 | ||||||||
| WBStrain00005680 | |||||||||
| WBStrain00005722 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (22) | |||||||||
| Contained_in_operon | CEOP1700 | ||||||||
| Ortholog (42) | |||||||||
| Paralog | WBGene00000137 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00000138 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00011615 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00000139 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00016061 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019154 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description (2) | |||||||||
| Disease_info | Potential_model | DOID:986 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29079) | ||||
| DOID:8947 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29079) | ||||||
| DOID:684 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29079) | ||||||
| DOID:1612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29079) | ||||||
| Molecular_info | Corresponding_CDS | Y40B1B.6 | |||||||
| Corresponding_transcript | Y40B1B.6.1 | ||||||||
| Y40B1B.6.2 | |||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf985868 | ||||||||
| WBsf1011076 | |||||||||
| WBsf218735 | |||||||||
| WBsf218736 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004611 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00089593 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00091519 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022756 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089623 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056320 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036977 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2274 | ||||||||
| Expr8609 | |||||||||
| Expr1015205 | |||||||||
| Expr1032494 | |||||||||
| Expr1159808 | |||||||||
| Expr2016092 | |||||||||
| Expr2034327 | |||||||||
| Construct_product | WBCnstr00020449 | ||||||||
| WBCnstr00039711 | |||||||||
| Regulate_expr_cluster | WBPaper00033101:spr-5_regulated | ||||||||
| WBPaper00060886:spr-5(by101);met-2(n4256)_downregulated | |||||||||
| WBPaper00060886:spr-5(by101);met-2(n4256)_upregulated | |||||||||
| WBPaper00060886:spr-5(by101)_downregulated | |||||||||
| WBPaper00060886:spr-5(by101)_upregulated | |||||||||
| Antibody | WBAntibody00001911 | ||||||||
| WBAntibody00001912 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (100) | |||||||||
| Interaction (81) | |||||||||
| WBProcess | WBbiopr:00000014 | ||||||||
| Map_info | Map | I | Position | 20.7399 | Error | 0.137006 | |||
| Positive | Positive_clone | Y40B1B | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4694 | |||||||
| 5003 | |||||||||
| 5554 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (63) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
