Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00004149

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00004149SMapS_parentSequenceT16A1
IdentityVersion2
NameCGC_nametrpl-5Person_evidenceWBPerson260
Sequence_nameT16A1.7
Molecular_nameT16A1.7
T16A1.7.1
CE44917
Other_namepqn-66Person_evidenceWBPerson625
CELE_T16A1.7Accession_evidenceNDBBX284602
Public_nametrpl-5
DB_infoDatabaseAceViewgene2C370
WormQTLgeneWBGene00004149
WormFluxgeneWBGene00004149
NDBlocus_tagCELE_T16A1.7
PanthergeneCAEEL|WormBase=WBGene00004149|UniProtKB=P91448
familyPTHR13800
NCBIgene188546
RefSeqproteinNM_061776.5
TREEFAMTREEFAM_IDTF315286
TrEMBLUniProtAccP91448
UniProt_GCRPUniProtAccP91448
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:34WBPerson1971EventImportedInitial conversion from geneace
211 Apr 2012 13:48:21WBPerson2970Name_changeCGC_nametrpl-5
Other_namepqn-66
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtrpl
AlleleWBVar00092718Inferred_automaticallyFrom strain object: RB1350
WBVar01499702
WBVar02120604
WBVar02123182
WBVar00215171
WBVar00100773
WBVar02075094
WBVar02123007
WBVar00100774
WBVar02121537
WBVar02077528
WBVar02122097
WBVar01535358
WBVar02152373
WBVar01362277
WBVar01546304
WBVar01535359
WBVar00277272
WBVar01362279
WBVar01362281
WBVar00100794
WBVar00298120
WBVar00545858
WBVar01500106
WBVar00545859
WBVar00545860
WBVar00545861
WBVar02124326
WBVar02014293
WBVar01684534
WBVar01684535
WBVar01684536
WBVar01684537
WBVar02121946
WBVar01684538
WBVar01684539
WBVar01240984
WBVar02077207
WBVar02124543
WBVar02122524
WBVar01718159
WBVar00358463
WBVar01718160
WBVar00358464
WBVar01718161
WBVar00358465
WBVar00358466
WBVar00358467
WBVar01912042
WBVar02075359
WBVar00358468
WBVar01912043
WBVar00358469
WBVar00358470
WBVar00358471
WBVar00358472
WBVar00358473
WBVar00358474
WBVar00358475
WBVar00358476
WBVar00358477
WBVar00358478
WBVar00092710
WBVar00091183
WBVar01891501
WBVar02006880
WBVar01576138
WBVar01959315
WBVar00709530
WBVar00709531
WBVar00268123
WBVar00709532
WBVar00709533
WBVar00709534
WBVar02122773
WBVar00709535
WBVar00709536
WBVar00709537
WBVar00166044
WBVar00709538
WBVar00166045
WBVar00166046
WBVar00709539
WBVar00709540
WBVar00166047
WBVar01477038
WBVar00709541
WBVar01477039
WBVar00166048
WBVar00709542
WBVar01477040
WBVar02121124
WBVar01477041
WBVar00709543
WBVar00709544
WBVar01477042
WBVar01477043
WBVar00709545
WBVar00709546
WBVar01477044
WBVar00709547
WBVar01477045
WBVar01477046
WBVar00709548
WBVar01477047
WBVar00709549
WBVar00709550
WBVar01477048
WBVar00709551
WBVar00709552
WBVar00709553
WBVar00709554
WBVar00709555
WBVar00709556
WBVar00709557
WBVar00709558
WBVar02151045
WBVar00709559
WBVar02047973
WBVar00709560
WBVar00709561
WBVar00709562
WBVar02122433
WBVar02120776
WBVar00709563
WBVar00709564
WBVar00709565
WBVar00709566
WBVar00709567
WBVar01641522
StrainWBStrain00032049
WBStrain00032053
WBStrain00036239
RNASeq_FPKM (74)
GO_annotation00051079
00051080
00051081
00051082
Ortholog (15)
ParalogWBGene00020972Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00021408Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00021404Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000425Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001651Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001795Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001796Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008731Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionThe protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).Paper_evidenceWBPaper00005068
WBPaper00012788
WBPaper00012830
WBPaper00012882
WBPaper00012897
WBPaper00013003
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable monoatomic cation channel activity. Predicted to be involved in monoatomic cation transmembrane transport. Predicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST16A1.7
Corresponding_CDS_historyT16A1.7:wp90
T16A1.7:wp185
T16A1.7:wp214
Corresponding_transcriptT16A1.7.1
Other_sequenceGP00855
GPC00387_1
Associated_featureWBsf665236
WBsf986873
WBsf986874
WBsf222742
Experimental_infoRNAi_resultWBRNAi00018755Inferred_automaticallyRNAi_primary
WBRNAi00053398Inferred_automaticallyRNAi_primary
Expr_patternExpr1027450
Expr1156975
Expr2017505
Expr2035644
Microarray_results (18)
Expression_cluster (114)
InteractionWBInteraction000324516
WBInteraction000333099
WBInteraction000340304
WBInteraction000401266
WBInteraction000401267
WBInteraction000469409
Map_infoMapIIPosition-13.8809Error0.003461
PositivePositive_cloneT16A1Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point5209
4533
5452
Pseudo_map_position
ReferenceWBPaper00027280
WBPaper00043908
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene