WormBase Tree Display for Variation: WBVar00100794
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WBVar00100794 | Name | Public_name | WBVar00100794 | ||
---|---|---|---|---|---|
Other_name | pas5653 | ||||
cewivar00508094 | |||||
T16A1.7.1:c.873C>T | |||||
CE44917:p.Ser291= | |||||
HGVSg | CHROMOSOME_II:g.2088444G>A | ||||
Sequence_details | SMap | S_parent | Sequence | T16A1 | |
Flanking_sequences | ataaacctaagcctaagtcaagacccaagcaaaagcctaatgctaagactaatcctaatcttaaggctaagcttaagtctaagtctaagcctaaaccttagcctaatcttgagcctaggcctaagcttgagcctgaacctaagctgaggcctaagcctttacctaagcctaagtctgtgagcttaccaaatgatcaattgacttgataattgtcatagacacttgtgctatgagcaccgcgggaacaaacagaaaagggagcatttcccagaagccaagactacttgtactgtcgtaact | ctgtaaaacggataacggcatagcatataggcgaacatgagtatataagcaagtcgaaatgtctggaaaaaattgaacgaaatttctttggaaactttaattattacccaattcagcgtgtgtttgatcgttttcacggccttatttcgagtctccattaagtgtaagcatggcctgagagataggaacttctgtaaaaagattgacacattttcaaatttaacagcacatcatttcaactaataattacagaactccaaaaaactgagccgtgttcaagcgcccgacaatttcagggct | |||
Mapping_target | T16A1 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | ||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00004149 | |||
Transcript | T16A1.7.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | T16A1.7.1:c.873C>T | ||||
HGVSp | CE44917:p.Ser291= | ||||
cDNA_position | 891 | ||||
CDS_position | 873 | ||||
Protein_position | 291 | ||||
Exon_number | 8/14 | ||||
Codon_change | agC/agT | ||||
Amino_acid_change | S | ||||
Method | WGS_Pasadena_Quinlan |