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WormBase Tree Display for Variation: WBVar00100794

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Name Class

WBVar00100794NamePublic_nameWBVar00100794
Other_namepas5653
cewivar00508094
T16A1.7.1:c.873C>T
CE44917:p.Ser291=
HGVSgCHROMOSOME_II:g.2088444G>A
Sequence_detailsSMapS_parentSequenceT16A1
Flanking_sequencesataaacctaagcctaagtcaagacccaagcaaaagcctaatgctaagactaatcctaatcttaaggctaagcttaagtctaagtctaagcctaaaccttagcctaatcttgagcctaggcctaagcttgagcctgaacctaagctgaggcctaagcctttacctaagcctaagtctgtgagcttaccaaatgatcaattgacttgataattgtcatagacacttgtgctatgagcaccgcgggaacaaacagaaaagggagcatttcccagaagccaagactacttgtactgtcgtaactctgtaaaacggataacggcatagcatataggcgaacatgagtatataagcaagtcgaaatgtctggaaaaaattgaacgaaatttctttggaaactttaattattacccaattcagcgtgtgtttgatcgttttcacggccttatttcgagtctccattaagtgtaagcatggcctgagagataggaacttctgtaaaaagattgacacattttcaaatttaacagcacatcatttcaactaataattacagaactccaaaaaactgagccgtgttcaagcgcccgacaatttcagggct
Mapping_targetT16A1
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004604From_analysisWGS_Pasadena_Quinlan
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00023665From_analysisMillion_mutation_project_reanalysis
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00004149
TranscriptT16A1.7.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScT16A1.7.1:c.873C>T
HGVSpCE44917:p.Ser291=
cDNA_position891
CDS_position873
Protein_position291
Exon_number8/14
Codon_changeagC/agT
Amino_acid_changeS
MethodWGS_Pasadena_Quinlan