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WormBase Tree Display for Gene: WBGene00003239

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Name Class

WBGene00003239SMapS_parentSequenceC35C5
IdentityVersion1
NameCGC_namemig-2Person_evidenceWBPerson261
Sequence_nameC35C5.4
Molecular_nameC35C5.4a
C35C5.4a.1
CE18544
C35C5.4b
CE50721
C35C5.4b.1
Other_nameCELE_C35C5.4Accession_evidenceNDBBX284606
Public_namemig-2
DB_infoDatabaseAceViewgeneXM167
WormQTLgeneWBGene00003239
WormFluxgeneWBGene00003239
NDBlocus_tagCELE_C35C5.4
PanthergeneCAEEL|WormBase=WBGene00003239|UniProtKB=G5EBV3
familyPTHR24072
NCBIgene181344
RefSeqproteinNM_077530.5
NM_001313405.4
TrEMBLUniProtAccA0A0K3AYI6
G5EBV3
UniProt_GCRPUniProtAccG5EBV3
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:31WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmig
Allele (39)
Legacy_informationrh17 : variable abnormal migration of Q neuroblasts HSN cells CAN cells.
[C.elegansII] rh17 : variable abnormal migration of Q neuroblasts, HSN cells, CAN cells etc.; Egl; uncoordinated; axon defects. OA1. [Hedgecock et al. 1987; Desai et al. 1988; NJ]
[Zipkin ID, Kindt RM, Kenyon CJ] mu28 homozygotes exhibit abnormal migration of Q daughters. Predicted gene C35C5.4, encodes Rho-related protein.
StrainWBStrain00024138
WBStrain00024141
WBStrain00024146
WBStrain00024159
WBStrain00024170
WBStrain00024172
WBStrain00028737
WBStrain00028748
WBStrain00032460
WBStrain00004808
RNASeq_FPKM (74)
GO_annotation (56)
OrthologWBGene00058267Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00036972Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00119449Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WBGene00191357Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00162017Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00162244Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00133086Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00132141Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00075387Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00122168Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00222871Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g11873Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g15375Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g1852Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g18789Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15801Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g10035Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2882Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g5475Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g28766Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12602Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00054.g2807Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_X.g23152Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold553.g3669Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00026.g1506Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01103Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_023804Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01115Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g2300Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0090700Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g20087Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00239474Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00257168Strongyloides rattiFrom_analysisWormBase-Compara
FB:FBgn0039532Drosophila melanogasterFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-030131-8877Danio rerioFrom_analysisEnsEMBL-Compara
OMA
ZFIN:ZDB-GENE-060503-820Danio rerioFrom_analysisEnsEMBL-Compara
OMA
HGNC:672Homo sapiensFrom_analysisEnsEMBL-Compara
OMA
MGI:1928370Mus musculusFrom_analysisEnsEMBL-Compara
OMA
RGD:621310Rattus norvegicusFrom_analysisEnsEMBL-Compara
OMA
ParalogWBGene00000390Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000424Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00004357Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00004287Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022177Caenorhabditis elegansFrom_analysisPanther
WBGene00009059Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012532Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019544Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionmig-2 encodes a member of the RhoG family of GTP-binding proteins; MIG-2 activity is required for migration of Q neuroblasts, HSN neurons, and CAN cells as well as neurite outgrowth and guidance; in regulating Q neuroblast migration and dendrite outgrowth, MIG-2 functions upstream of the ANI-1 anillin to asymmetrically regulate ANI-1 localization, and thus stabilize F-actin, at the leading edge and growth cone; MIG-2 is expressed in early embryos and in adults in the vulva, gonadal distal tip cells, and the sex myoblasts and their descendants.Paper_evidenceWBPaper00046615
WBPaper00002878
Curator_confirmedWBPerson48
WBPerson1843
WBPerson567
Date_last_updated28 May 2015 00:00:00
Automated_descriptionEnables GTPase activity and protein kinase binding activity. Involved in several processes, including actin cytoskeleton organization; axon guidance; and cell migration. Located in cytoplasm; cytoplasmic side of plasma membrane; and neuron projection. Expressed in several structures, including CAN; HSN; distal tip cell; touch receptor neurons; and vulval cell. Used to study epilepsy. Is an ortholog of human RHOG (ras homolog family member G).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoExperimental_modelDOID:1826Homo sapiensPaper_evidenceWBPaper00035198
Curator_confirmedWBPerson38202
Date_last_updated04 Jun 2018 00:00:00
Models_disease_assertedWBDOannot00000557
Molecular_infoCorresponding_CDSC35C5.4a
C35C5.4b
Corresponding_transcriptC35C5.4a.1
C35C5.4b.1
Other_sequence (25)
Associated_featureWBsf663364
WBsf1007033
WBsf1007034
WBsf1007035
WBsf236390
WBsf236391
WBsf236392
WBsf236393
WBsf236394
Experimental_infoRNAi_result (20)
Expr_patternExpr1463
Expr8941
Expr12554
Expr16070
Expr1019676
Expr1031535
Expr1145980
Expr2013570
Expr2031803
Drives_constructWBCnstr00000269
WBCnstr00001031
WBCnstr00001032
WBCnstr00036166
Construct_productWBCnstr00001031
WBCnstr00007681
WBCnstr00007697
WBCnstr00009004
WBCnstr00017999
WBCnstr00036166
Microarray_results (25)
Expression_cluster (122)
Interaction (285)
WBProcessWBbiopr:00000006
WBbiopr:00000015
WBbiopr:00000107
WBbiopr:00000111
Map_infoMapXPosition4.35742Error0.06415
Well_ordered
PositivePositive_cloneC35C5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point3673
Reference (178)
RemarkData extracted from Zipkin et al. (1997)
MethodGene