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WormBase Tree Display for Gene: WBGene00002980

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Name Class

WBGene00002980EvidenceCGC_data_submission
SMapS_parentSequenceC32D5
IdentityVersion2
NameCGC_namelgg-1Person_evidenceWBPerson321
Sequence_nameC32D5.9
Molecular_nameC32D5.9
C32D5.9.1
CE01849
Other_name2G636Accession_evidenceEMBLAF326943
atg-8.1Person_evidenceWBPerson649
CELE_C32D5.9Accession_evidenceNDBBX284602
Public_namelgg-1
DB_infoDatabaseAceViewgene2G636
WormQTLgeneWBGene00002980
WormFluxgeneWBGene00002980
NDBlocus_tagCELE_C32D5.9
PanthergeneCAEEL|WormBase=WBGene00002980|UniProtKB=Q09490
familyPTHR10969
NCBIgene174050
RefSeqproteinNM_062876.8
SwissProtUniProtAccQ09490
TREEFAMTREEFAM_IDTF314556
UniProt_GCRPUniProtAccQ09490
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:30WBPerson1971EventImportedInitial conversion from geneace
229 Feb 2008 11:29:00WBPerson2970Name_changeOther_nameatg-8.1
StatusLive
Gene_info (11)
Modifies_diseaseDOID:332
Modifies_disease_in_annotationWBDOannot00001227
Molecular_infoCorresponding_CDSC32D5.9
Corresponding_transcriptC32D5.9.1
Other_sequence (181)
Associated_feature (11)
Experimental_infoRNAi_result (59)
Expr_pattern (17)
Drives_construct (18)
Construct_product (37)
AntibodyWBAntibody00002128
WBAntibody00002775
WBAntibody00002776
WBAntibody00002864
WBAntibody00002888
WBAntibody00002907
WBAntibody00003022
Microarray_results (18)
Expression_clusterWBPaper00032097:CGH-1-associated-mRNA
WBPaper00032528:L3_enriched
WBPaper00033065:isp-1-1(qm150)_upregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00038118:aak-2(gt33)_upregulated
WBPaper00038118:stress_upregulated_N2
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00045050:csr-1(hypomorph)_downregulated
WBPaper00045314:S.aureus-induced_N2
WBPaper00045521:Oogenic
WBPaper00045774:clk-1_upregulated
WBPaper00045974:NSM_enriched_totalRNA_RNAseq
WBPaper00046024:sleep_upregulated_oscillating
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00046497:B.thuringiensis_upregulated_protein
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050199:hsf-1(ok600)_upregulated
WBPaper00050344:AFD-neuron_enriched
WBPaper00050344:ASER-neuron_enriched
WBPaper00050448:KGB-1-induced
WBPaper00050468:hlh-30-dependent_Cry5B_regulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050514:CEBP-1_interacting
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:germline_enriched
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051257:Levamisole_upregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053023:nlg-1(ok259)_downregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(ot267)_downregulated
WBPaper00053295:lin-22(ot269)_downregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_24h_regulated
WBPaper00053388:dauer_regulated_Cluster4
WBPaper00053713:Pheromone-induced_postdauer_vs_control_downregulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055049:S.gordonii_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055648:germline_expressed
WBPaper00055969:electromagnetic-field_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056139:soil-microbiota_upregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00057041:unc-70(cas983)_downregulated
WBPaper00057068:Cadmium_upregulated
WBPaper00057288:Cold_downregulated_protein
WBPaper00057288:iff-1(RNAi)_upregulated_protein
WBPaper00058948:PA14_downregulated
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059471:EGL-43_interacting
WBPaper00059763:neuron_expressed
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00059895:wounding_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060014:set-2(zr2012)_upregulated
WBPaper00060084:cco-1(RNAi)_upregulated_N2
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061527:chd-7_16664-jmjd-3.1
WBPaper00061651:AIZ_enriched
WBPaper00061651:AVG_enriched
WBPaper00061651:PDE_enriched
WBPaper00061651:VB01_enriched
WBPaper00061651:VB02_enriched
WBPaper00061651:VB_enriched
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062456:doxycycline_downregulated_CB4856_protein
WBPaper00064055:trl-1(cas1077)_downregulated_non-starved
WBPaper00064055:trl-1(cas1077)_downregulated_starved
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064130:Beta-Amyloid_24h_downregulated_mRNA
WBPaper00064532:pals-25(icb98)_upregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064735:bet-1(RNAi)_vs_N2_upregulated
WBPaper00064871:hypoxia_downregulated_F1
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065258:anchor-cell_enriched
WBPaper00065945:epidermis-rpoa-2(-)_downregulated_transcript
WBPaper00065995:M.humicola-extract_downregulated_N2
WBPaper00066062:xrep-4(lax137)_upregulated
cgc4386_cluster_4_3
cgc4489_group_9
WBPaper00025032:cluster_45
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00030985:Enterococcus_faecalis_upregulated
WBPaper00030985:Photorhabdus_luminescens_upregulated
WBPaper00030985:Serratia_marcesens_downregulated
WBPaper00032948:StarveUp2
WBPaper00034739:N2moreDR1350
WBPaper00034757:up_by_oxidative_stress
WBPaper00035227:heat_shock_regulated
WBPaper00035905:FBF-1_Associated
WBPaper00036123:Atrazine_regulated
WBPaper00036286:Pattern_F
WBPaper00037901:GLD-1_mRNA_targets
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00038231:Cry5B_2-fold_upregulated
WBPaper00040184:hcf-1up_sir-2.1up_daf-2up
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_old
WBPaper00041370:spg-7(RNAi)_upregulated
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00042178:hlh-29(tm284)_upregulated
WBPaper00044091:Bpseudomallei_induced_2h
WBPaper00045015:nhr-25(RNAi)_upregulated
WBPaper00045960:L1-L4-lethargus_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00048989:N2_rapamycin_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(83_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_ME
[cgc6390]:Cluster_A
Interaction (287)
WBProcessWBbiopr:00000003
Map_infoMapIIPosition-0.380826Error0.000183
PositivePositive_cloneC32D5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (176)
RemarkSequence connection from [Kimura Y]
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene