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WormBase Tree Display for Gene: WBGene00001617

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Name Class

WBGene00001617SMapS_parentSequenceF41B4
IdentityVersion1
NameCGC_nameglr-6Person_evidenceWBPerson42
Sequence_nameF41B4.4
Molecular_nameF41B4.4a
F41B4.4a.1
CE35715
F41B4.4b
CE30983
F41B4.4b.1
Other_nameCELE_F41B4.4Accession_evidenceNDBBX284606
Public_nameglr-6
DB_infoDatabaseAceViewgeneXH456
WormQTLgeneWBGene00001617
WormFluxgeneWBGene00001617
NDBlocus_tagCELE_F41B4.4
PanthergeneCAEEL|WormBase=WBGene00001617|UniProtKB=Q8MXV8
familyPTHR18966
NCBIgene180955
RefSeqproteinNM_171712.5
NM_001383601.1
TrEMBLUniProtAccQ8MXV7
Q8MXV8
UniProt_GCRPUniProtAccQ8MXV8
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:25WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classglr
AlleleWBVar00507044
WBVar01498964
WBVar00507045
WBVar01156922
WBVar00260021
WBVar01156923
WBVar01156924
WBVar01156925
WBVar01156926
WBVar01156927
WBVar01156928
WBVar01156929
WBVar01156930
WBVar01156931
WBVar01156932
WBVar01156933
WBVar01882010
WBVar01882011
WBVar01156934
WBVar01882012
WBVar01156935
WBVar01882013
WBVar01156936
WBVar01156937
WBVar01882014
WBVar01882015
WBVar01156938
WBVar01156939
WBVar01882016
WBVar01156940
WBVar01882017
WBVar01156941
WBVar01882018
WBVar01156942
WBVar01156943
WBVar01156944
WBVar01156945
WBVar01156946
WBVar01156947
WBVar00250464
WBVar01156948
WBVar01156949
WBVar01156950
WBVar00251573
WBVar01156951
WBVar01156952
WBVar00080121
WBVar01156953
WBVar00080122
WBVar01156954
WBVar02045022
WBVar01156955
WBVar01156956
WBVar01156957
WBVar02122483
WBVar01469501
WBVar02032733
WBVar01830716
WBVar01927051
WBVar02122729
WBVar00034986
WBVar00034991
WBVar00034996
WBVar00035001
WBVar00035006
WBVar01526641
WBVar01340273
WBVar01340274
WBVar02064451
WBVar02064452
WBVar02064453
WBVar02064454
WBVar00507036
WBVar00507037
WBVar00507038
WBVar00507039
WBVar00507040
WBVar00507041
WBVar00507042
WBVar01500067
WBVar00507043
RNASeq_FPKM (74)
GO_annotation (20)
Contained_in_operonCEOPX084
Ortholog (31)
ParalogWBGene00001612Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001613Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001614Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001615Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001616Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001618Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001619Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003774Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00003775Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00012190Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionglr-6 encodes a putative non-NMDA ionotropic glutamate receptor subunit,most closely related to GLR-5, possibly of the kainate subfamily; glr-6(along with glr-3) is expressed in only one cell type, the thermosensoryinterneuron RIA, from near hatching onward to adulthood.Paper_evidenceWBPaper00004529
WBPaper00004567
Curator_confirmedWBPerson567
Date_last_updated23 Aug 2006 00:00:00
Automated_descriptionPredicted to enable glutamate receptor activity and transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential. Predicted to be involved in glutamatergic synaptic transmission and modulation of chemical synaptic transmission. Predicted to be located in postsynaptic density membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF41B4.4a
F41B4.4b
Corresponding_CDS_historyF41B4.4a:wp109
Corresponding_transcriptF41B4.4a.1
F41B4.4b.1
Other_sequence (14)
Associated_featureWBsf654092
WBsf655671
WBsf237524
Experimental_infoRNAi_resultWBRNAi00046941Inferred_automaticallyRNAi_primary
WBRNAi00014715Inferred_automaticallyRNAi_primary
WBRNAi00000351Inferred_automaticallyRNAi_primary
WBRNAi00032069Inferred_automaticallyRNAi_primary
Expr_patternExpr821
Expr1027470
Expr1030971
Expr1150808
Expr2012117
Expr2030353
Drives_constructWBCnstr00013184
WBCnstr00015690
WBCnstr00015692
WBCnstr00015693
WBCnstr00015694
WBCnstr00015696
WBCnstr00015697
WBCnstr00036821
Construct_productWBCnstr00013184
WBCnstr00015867
WBCnstr00036821
Microarray_results (25)
Expression_cluster (103)
Interaction (27)
Map_infoMapXPosition-2.34917Error0.00404
PositivePositive_cloneF41B4Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
Reference (18)
RemarkSequence connection from [Brockie PJ, Maricq AV, Aronoff R], 02/06/11 krb.
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene