WormBase Tree Display for Gene: WBGene00001158
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| WBGene00001158 | Evidence | Person_evidence | WBPerson3205 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Author_evidence | Van Gilst M | ||||||||
| SMap | S_parent | Sequence | F01G10 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | ech-9 | |||||||
| Sequence_name | F01G10.3 | ||||||||
| Molecular_name | F01G10.3a | ||||||||
| F01G10.3a.1 | |||||||||
| CE35451 | |||||||||
| F01G10.3b | |||||||||
| CE49962 | |||||||||
| F01G10.3b.1 | |||||||||
| Other_name | CELE_F01G10.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ech-9 | ||||||||
| DB_info | Database (10) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ech | ||||||||
| Allele (45) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00000391 | ||||||||
| 00000392 | |||||||||
| 00000393 | |||||||||
| 00030660 | |||||||||
| 00108339 | |||||||||
| 00108340 | |||||||||
| 00108341 | |||||||||
| 00108342 | |||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00001157 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001150 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00007129 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00010035 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019978 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00020347 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00022130 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable 3-hydroxyacyl-CoA dehydrogenase activity. Predicted to be involved in fatty acid beta-oxidation. Predicted to be located in peroxisome. Human ortholog(s) of this gene implicated in Fanconi renotubular syndrome 3. Is an ortholog of human EHHADH (enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080759 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3247) | ||||
| Molecular_info | Corresponding_CDS | F01G10.3a | |||||||
| F01G10.3b | |||||||||
| Corresponding_CDS_history | F01G10.3:wp109 | ||||||||
| Corresponding_transcript | F01G10.3a.1 | ||||||||
| F01G10.3b.1 | |||||||||
| Other_sequence | CRC08797_1 | ||||||||
| FG980875.1 | |||||||||
| HBC12703_1 | |||||||||
| Tcol_isotig17282 | |||||||||
| CR12067 | |||||||||
| Tcir_isotig23141 | |||||||||
| Tcol_isotig21554 | |||||||||
| Associated_feature | WBsf230703 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00030549 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00082449 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00102620 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012745 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043765 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015628 | ||||||||
| Expr1147743 | |||||||||
| Expr2011173 | |||||||||
| Expr2029409 | |||||||||
| Drives_construct | WBCnstr00037058 | ||||||||
| Construct_product | WBCnstr00037058 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (337) | |||||||||
| Interaction (35) | |||||||||
| Map_info | Map | IV | Position | 4.56237 | |||||
| Positive | Positive_clone | F01G10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026800 | ||||||||
| WBPaper00027365 | |||||||||
| WBPaper00029292 | |||||||||
| WBPaper00033126 | |||||||||
| WBPaper00033136 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060399 | |||||||||
| WBPaper00062625 | |||||||||
| WBPaper00064093 | |||||||||
| WBPaper00065877 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
